RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 LINC00301Q8NCQ3 95 aa13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 BICD1Q96G01 975 aa13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 TMEM175Q9BSA9 504 aa13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 TMEM134Q9H6X4 195 aa13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 LARSQ9P2J5 1176 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 CCDC39Q9UFE4 941 aa13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 CD207Q9UJ71 328 aa13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 TNFSF13BQ9Y275 285 aa13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 ZMYM2Q9UBW7 1377 aa13.06□□□□□ -0.32
PPP4R1-219ENST00000581250 GRXCR2A6NFK2 248 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 CASTOR2A6NHX0 329 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 C2CD2LO14523 706 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 CXCL14O95715 111 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 ALDH2P05091 517 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 STAT6P42226 847 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 MATR3P43243 847 aaKnown RBP eCLIP13.05□□□□□ -0.329e-6■■■■□ 21.7
PPP4R1-219ENST00000581250 GIT2Q14161 759 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 DYMQ7RTS9 669 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 APBB1IPQ7Z5R6 666 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 TMEM87AQ8NBN3 555 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 HASPINQ8TF76 798 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 ZBTB45Q96K62 511 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 CDCA3Q99618 268 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 PAAF1Q9BRP4 392 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 TCHPQ9BT92 498 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 APOL5Q9BWW9 433 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 PARVGQ9HBI0 331 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 CLEC1BQ9P126 229 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 STK17AQ9UEE5 414 aa13.05□□□□□ -0.32
PPP4R1-219ENST00000581250 PDCD11Q14690 1871 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 CARNS1A5YM72 827 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 TNFRSF10AO00220 468 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 ABLIM1O14639 778 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 NR1I2O75469 434 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 CTSAP10619 480 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 DDIT3P35638 169 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 ZNF131P52739 623 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 SMAD4Q13485 552 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 BMS1Q14692 1282 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 NOLC1Q14978 699 aaKnown RBP eCLIP13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 SEZ6Q53EL9 994 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 TAS1R1Q7RTX1 841 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 HAUS6Q7Z4H7 955 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 SFR1Q86XK3 245 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 MRPL43Q8N983 215 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 CHAMP1Q96JM3 812 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 B3GALT6Q96L58 329 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 PTPRHQ9HD43 1115 aa13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 MORC2Q9Y6X9 1032 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-219ENST00000581250 MYMKA6NI61 221 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 HNRNPDLO14979 420 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 MBTPS2O43462 519 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 CLASP2O75122 1294 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 YEATS4O95619 227 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 URODP06132 367 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 THP07101 528 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 SRGAP2BP0DMP2 458 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 PROZP22891 400 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 NMT1P30419 496 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 GRM5P41594 1212 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 YARSP54577 528 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 DNM1Q05193 864 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 TUSC3Q13454 348 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 CCDC73Q6ZRK6 1079 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 SV2BQ7L1I2 683 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 FAM178BQ8IXR5 827 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 SMRP1Q8NCR6 262 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 NTPCRQ9BSD7 190 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 HERC2P3Q9BVR0 1158 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 CCDC94Q9BW85 323 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 COLEC11Q9BWP8 271 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 GOLGA2P5Q9HBQ8 144 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 FAM50BQ9Y247 325 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 HCFC2Q9Y5Z7 792 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 PLXNA3P51805 1871 aa13.03□□□□□ -0.32
PPP4R1-219ENST00000581250 FSD2A1L4K1 749 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 H0YCG3 227 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 TRAK2O60296 914 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 PPP6R2O75170 966 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 TOM1L1O75674 476 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 KIF4AO95239 1232 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 SOD2P04179 222 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 MCF2P10911 925 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 EPCAMP16422 314 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 SSTR3P32745 418 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 GLUD2P49448 558 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 LIG4P49917 911 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 HSP90AA2PQ14568 343 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 NAB2Q15742 525 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 PUS10Q3MIT2 529 aaKnown RBP13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 ZC2HC1CQ53FD0 456 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 DDX12PQ92771 950 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 STAMQ92783 540 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms