RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 STRN3Q13033 797 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 SEZ6Q53EL9 994 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 ZPBP2Q6X784 338 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 RBM23Q86U06 439 aaKnown RBP22.06■■□□□ 1.12
SS18-218ENST00000581021 FAM178BQ8IXR5 827 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 VN1R2Q8NFZ6 395 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 AUTS2Q8WXX7 1259 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 PABPC5Q96DU9 382 aaKnown RBP22.06■■□□□ 1.12
SS18-218ENST00000581021 TMEM169Q96HH4 297 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 ASB2Q96Q27 587 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 PAAF1Q9BRP4 392 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 ZBP1Q9H171 429 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 KBTBD4Q9NVX7 518 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 COG5Q9UP83 839 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 TISP43B9A030 160 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 PER2O15055 1255 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 TBX10O75333 385 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 TOM1L1O75674 476 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 PPP1R37O75864 691 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 GLP2RO95838 553 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 EFEMP2O95967 443 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 MCF2P10911 925 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 KCNA5P22460 613 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 CASP5P51878 434 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 KRT85P78386 507 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 GTF2BQ00403 316 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 KRT17Q04695 432 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 GLRA4Q5JXX5 417 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 DDX53Q86TM3 631 aaKnown RBP22.05■■□□□ 1.12
SS18-218ENST00000581021 MICAL1Q8TDZ2 1067 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 FAM193BQ96PV7 902 aaPredicted RBP22.05■■□□□ 1.12
SS18-218ENST00000581021 STRA6Q9BX79 667 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 IGFLR1Q9H665 355 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 ENTPD7Q9NQZ7 604 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 KCNG1Q9UIX4 513 aa22.05■■□□□ 1.12
SS18-218ENST00000581021 CUL9Q8IWT3 2517 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 H3BQ06 376 aaPredicted RBP22.04■■□□□ 1.12
SS18-218ENST00000581021 POLR2DO15514 142 aaKnown RBP22.04■■□□□ 1.12
SS18-218ENST00000581021 PIGRP01833 764 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 IGFBP6P24592 240 aaPredicted RBP22.04■■□□□ 1.12
SS18-218ENST00000581021 OR1G1P47890 313 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 MRPS5P82675 430 aaKnown RBP22.04■■□□□ 1.12
SS18-218ENST00000581021 MCL1Q07820 350 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 NOLC1Q14978 699 aaKnown RBP eCLIP22.04■■□□□ 1.12
SS18-218ENST00000581021 ZBTB41Q5SVQ8 909 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 MAP4K3Q8IVH8 894 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 VPS52Q8N1B4 723 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 SPATA32Q96LK8 384 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 RPS6KC1Q96S38 1066 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 TNMDQ9H2S6 317 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 ST6GALNAC4Q9H4F1 302 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 CLDND1Q9NY35 253 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 TBC1D7Q9P0N9 293 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 PUF60Q9UHX1 559 aaKnown RBP22.04■■□□□ 1.12
SS18-218ENST00000581021 FAN1Q9Y2M0 1017 aa22.04■■□□□ 1.12
SS18-218ENST00000581021 CASTOR2A6NHX0 329 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 H0YCG3 227 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 FAM189A1O60320 539 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 ALDH2P05091 517 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 CASP1P29466 404 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 KCNA1Q09470 495 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 DUSP6Q16828 381 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 XKR4Q5GH76 650 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 TJAP1Q5JTD0 557 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 ALKAL1Q6UXT8 129 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 TAS1R1Q7RTX1 841 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 ZNF720Q7Z2F6 126 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 SNX27Q96L92 541 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 ZMAT2Q96NC0 199 aaKnown RBP22.03■■□□□ 1.12
SS18-218ENST00000581021 PPP1R10Q96QC0 940 aaKnown RBP22.03■■□□□ 1.12
SS18-218ENST00000581021 TCHPQ9BT92 498 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 TRIM9Q9C026 710 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 GDPD2Q9HCC8 539 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 MUC3AQ02505 3323 aa22.03■■□□□ 1.12
SS18-218ENST00000581021 C2orf71A6NGG8 1288 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 HNRNPDLO14979 420 aaKnown RBP22.02■■□□□ 1.12
SS18-218ENST00000581021 BMP1P13497 986 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 IDEP14735 1019 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 GAP43P17677 238 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 ADAM15Q13444 863 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 TUSC3Q13454 348 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 TMC7Q7Z402 723 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 RNF168Q8IYW5 571 aaPredicted RBP22.02■■□□□ 1.12
SS18-218ENST00000581021 EFHBQ8N7U6 833 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 MRPL43Q8N983 215 aaKnown RBP22.02■■□□□ 1.12
SS18-218ENST00000581021 IQUBQ8NA54 791 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 GLIS3Q8NEA6 775 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 HPS3Q969F9 1004 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 BICD1Q96G01 975 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 COL25A1Q9BXS0 654 aaPredicted RBP22.02■■□□□ 1.12
SS18-218ENST00000581021 CUEDC2Q9H467 287 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 TLE6Q9H808 572 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 NGRNQ9NPE2 291 aaKnown RBP22.02■■□□□ 1.12
SS18-218ENST00000581021 CLEC1BQ9P126 229 aa22.02■■□□□ 1.12
SS18-218ENST00000581021 TCHHQ07283 1943 aa22.02■■□□□ 1.11
SS18-218ENST00000581021 ANKRD63C9JTQ0 380 aa22.01■■□□□ 1.11
SS18-218ENST00000581021 MYBP10242 640 aa22.01■■□□□ 1.11
SS18-218ENST00000581021 PFKFB1P16118 471 aa22.01■■□□□ 1.11
SS18-218ENST00000581021 LIG4P49917 911 aa22.01■■□□□ 1.11
SS18-218ENST00000581021 SOX4Q06945 474 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms