RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 ALDH2P05091 517 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 MCF2P10911 925 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 CMA1P23946 247 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 PPM1AP35813 382 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 GRM5P41594 1212 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 CASP5P51878 434 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 TFF2Q03403 129 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 UBE3AQ05086 875 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 HYAL1Q12794 435 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 SLC39A4Q6P5W5 647 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 ZPBP2Q6X784 338 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 GRAMD1CQ8IYS0 662 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 MICAL1Q8TDZ2 1067 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 BICD1Q96G01 975 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 IGSF21Q96ID5 467 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 STRA6Q9BX79 667 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 TRIM9Q9C026 710 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 SCAND2PQ9GZW5 306 aaPredicted RBP13.24□□□□□ -0.29
USP8-212ENST00000560730 TNMDQ9H2S6 317 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 TLR9Q9NR96 1032 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 PANK4Q9NVE7 773 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 SERTAD1Q9UHV2 236 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 LZTS1Q9Y250 596 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 FAN1Q9Y2M0 1017 aa13.24□□□□□ -0.29
USP8-212ENST00000560730 TISP43B9A030 160 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 ANKRD63C9JTQ0 380 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 ACTN4O43707 911 aaKnown RBP13.23□□□□□ -0.29
USP8-212ENST00000560730 PPP1R37O75864 691 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 PFKFB1P16118 471 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 GAP43P17677 238 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 OR1G1P47890 313 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 KRT17Q04695 432 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 MCL1Q07820 350 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 KCNA1Q09470 495 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 GRIK3Q13003 919 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 NOLC1Q14978 699 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP8-212ENST00000560730 NAB2Q15742 525 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 HERC4Q5GLZ8 1057 aaPredicted RBP13.23□□□□□ -0.29
USP8-212ENST00000560730 APBB1IPQ7Z5R6 666 aaPredicted RBP13.23□□□□□ -0.29
USP8-212ENST00000560730 RBM23Q86U06 439 aaKnown RBP13.23□□□□□ -0.29
USP8-212ENST00000560730 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 TMEM169Q96HH4 297 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 RPS6KC1Q96S38 1066 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 TMEM175Q9BSA9 504 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 ST6GALNAC4Q9H4F1 302 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 IGFLR1Q9H665 355 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 MRPL44Q9H9J2 332 aaKnown RBP13.23□□□□□ -0.29
USP8-212ENST00000560730 MARCH5Q9NX47 278 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 SEL1LQ9UBV2 794 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 ZMYM2Q9UBW7 1377 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 PUF60Q9UHX1 559 aaKnown RBP13.23□□□□□ -0.29
USP8-212ENST00000560730 HPSEQ9Y251 543 aa13.23□□□□□ -0.29
USP8-212ENST00000560730 PRG3Q9Y2Y8 225 aaPredicted RBP13.23□□□□□ -0.29
USP8-212ENST00000560730 HIDE1A8MVS5 230 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 LINC01565O15544 149 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 CLDN3O15551 220 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 PIGRP01833 764 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 MYBP10242 640 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 AFMP43652 599 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 LIG4P49917 911 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 COASYQ13057 564 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 GLRA4Q5JXX5 417 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 ZBTB41Q5SVQ8 909 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 PLPP4Q5VZY2 271 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 TAS1R1Q7RTX1 841 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
USP8-212ENST00000560730 MAP4K3Q8IVH8 894 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 GLIS3Q8NEA6 775 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 AUTS2Q8WXX7 1259 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 HLA-CQ95604 372 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 C7orf25Q9BPX7 421 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 TCF25Q9BQ70 676 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 PAAF1Q9BRP4 392 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 CCDC94Q9BW85 323 aaPredicted RBP13.22□□□□□ -0.29
USP8-212ENST00000560730 BLZF1Q9H2G9 400 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 THEGQ9P2T0 379 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 ANK1P16157 1881 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.22□□□□□ -0.29
USP8-212ENST00000560730 SMIM28A0A1B0GU29 152 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 HNRNPDLO14979 420 aaKnown RBP13.22□□□□□ -0.29
USP8-212ENST00000560730 PER2O15055 1255 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 FAM189A1O60320 539 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 THP07101 528 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 SCP2P22307 547 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 IGFBP6P24592 240 aaPredicted RBP13.22□□□□□ -0.29
USP8-212ENST00000560730 TNFSF9P41273 254 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 MATR3P43243 847 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP8-212ENST00000560730 NRIP1P48552 1158 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 NDUFA8P51970 172 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 ASIC1P78348 528 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
USP8-212ENST00000560730 AMPD3Q01432 767 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 CUL4BQ13620 913 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 COL19A1Q14993 1142 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 CNNM4Q6P4Q7 775 aa13.22□□□□□ -0.29
USP8-212ENST00000560730 TMC7Q7Z402 723 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms