RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ZSCAN18Q8TBC5 510 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 CCDC110Q8TBZ0 833 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 ADAMTS18Q8TE60 1221 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 DNAAF4Q8WXU2 420 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 DDX1Q92499 740 aaKnown RBP4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 FATE1Q969F0 183 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 SMARCE1Q969G3 411 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 HRASLS5Q96KN8 279 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 ART5Q96L15 291 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 TBCDQ9BTW9 1192 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 DHRS4Q9BTZ2 278 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 SPATA9Q9BWV2 254 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 AGXT2Q9BYV1 514 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 SRCIN1Q9C0H9 1055 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 ATXN3LQ9H3M9 355 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 GSX1Q9H4S2 264 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 GRPEL1Q9HAV7 217 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 DDX4Q9NQI0 724 aaKnown RBP4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 AATFQ9NY61 560 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 TBC1D14Q9P2M4 693 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 SLC13A4Q9UKG4 626 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 GPR34Q9UPC5 381 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 SCAF8Q9UPN6 1271 aaKnown RBP4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 PRELID1Q9Y255 219 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 CRYL1Q9Y2S2 319 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 ZNF711Q9Y462 761 aa4.91□□□□□ -1.62
HMGB3P26-201ENST00000560051 TMEM265A0A087WTH1 108 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 GPR75-ASB3A0A0A6YYF3 556 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 LRRC14BA6NHZ5 514 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 CAPN9O14815 690 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 PLD2O14939 933 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 TLR3O15455 904 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 DYNC1LI2O43237 492 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 RANBP6O60518 1105 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 RNGTTO60942 597 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 NPTXRO95502 500 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 HSPA4LO95757 839 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 POLR3DP05423 398 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 PYGLP06737 847 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 PDHA1P08559 390 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 PF4V1P10720 104 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 TPP2P29144 1249 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 L1CAMP32004 1257 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 SOX6P35712 828 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 TCF7P36402 384 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 HADHAP40939 763 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 MTIF2P46199 727 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 NPTX2P47972 431 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 MCM2P49736 904 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 SEPHS1P49903 392 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 TKTL1P51854 596 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 HAND2P61296 217 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 LAMB3Q13751 1172 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 NFE2L1Q14494 772 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 SSPNQ14714 243 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 PCBP1Q15365 356 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 TERF2Q15554 542 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 CCDC85BQ15834 202 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 SPRED3Q2MJR0 410 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 CCDC40Q4G0X9 1142 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 SEZ6Q53EL9 994 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 FNDC3BQ53EP0 1204 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 XKR9Q5GH70 373 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 GPATCH4Q5T3I0 446 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 EMC10Q5UCC4 262 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 FBXW10Q5XX13 1052 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 CAPRIN2Q6IMN6 1127 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 ALKBH5Q6P6C2 394 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 CORO6Q6QEF8 472 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 C6orf15Q6UXA7 325 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 BNC2Q6ZN30 1099 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 MFSD6Q6ZSS7 791 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 CCDC149Q6ZUS6 474 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 LPCAT2Q7L5N7 544 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 ENOSF1Q7L5Y1 443 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 GALNT7Q86SF2 657 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 PPFIBP1Q86W92 1011 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 CCDC170Q8IYT3 715 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 SCYL3Q8IZE3 742 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 SLC7A5P1Q8MH63 180 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 AHI1Q8N157 1196 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 PPM1KQ8N3J5 372 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 ZBTB38Q8NAP3 1195 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 GOLM1Q8NBJ4 401 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 BBOF1Q8ND07 529 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 OR8K3Q8NH51 312 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 NSUN6Q8TEA1 469 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 DHX58Q96C10 678 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 AIFM3Q96NN9 605 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 NT5C1BQ96P26 610 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 PIGSQ96S52 555 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 TCF12Q99081 682 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 EYA3Q99504 573 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 BARD1Q99728 777 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 TCF25Q9BQ70 676 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 THUMPD2Q9BTF0 503 aaKnown RBP4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 TTLL2Q9BWV7 592 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 TEX13BQ9BXU2 312 aa4.9□□□□□ -1.63
HMGB3P26-201ENST00000560051 INTS2Q9H0H0 1204 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms