RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PDZD7Q9H5P4 517 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 WDR6Q9NNW5 1121 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 SNTG2Q9NY99 539 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 ADAM28Q9UKQ2 775 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 ANK1P16157 1881 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 DCHS1Q96JQ0 3298 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 MIA3Q5JRA6 1907 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 KRBA1A5PL33 1030 aa12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 CASTOR2A6NHX0 329 aa12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 XRCC6P12956 609 aaKnown RBP eCLIP12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 LIG1P18858 919 aa12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 PCBP1Q15365 356 aaKnown RBP eCLIP12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 CDCA2Q69YH5 1023 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 CCDC83Q8IWF9 413 aa12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 C4orf32Q8N8J7 132 aa12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 SMG7Q92540 1137 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 CCDC113Q9H0I3 377 aa12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 NT5C3AQ9H0P0 336 aa12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 DUSP12Q9UNI6 340 aa12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 CLUHO75153 1309 aa12.79□□□□□ -0.36
PRPF40B-212ENST00000551111 RECQL4O94761 1208 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 KIF4AO95239 1232 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 CFHP08603 1231 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 GBP2P32456 591 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 CLCN5P51795 746 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 NTHL1P78549 312 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 NCBP1Q09161 790 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 GRIK3Q13003 919 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 FAM187BQ17R55 369 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 SIX5Q8N196 739 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 CCDC43Q96MW1 224 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 POLR3CQ9BUI4 534 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 RPP25Q9BUL9 199 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 MFSD1Q9H3U5 465 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 TUFT1Q9NNX1 390 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 PPP4R2Q9NY27 417 aa12.78□□□□□ -0.36
PRPF40B-212ENST00000551111 EP300Q09472 2414 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 TADA2AO75478 443 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 PAPLNO95428 1278 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 CYP11B2P19099 503 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 RPA1P27694 616 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 TUSC3Q13454 348 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 TRIM29Q14134 588 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 HSP90AA2PQ14568 343 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 NT5DC1Q5TFE4 455 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 FAM171A1Q5VUB5 890 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 CD300LGQ6UXG3 332 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 SLC44A3Q8N4M1 653 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 NACC1Q96RE7 527 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 PRMT7Q9NVM4 692 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 FNIP2Q9P278 1114 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 STK39Q9UEW8 545 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 CA14Q9ULX7 337 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 GDAQ9Y2T3 454 aa12.77□□□□□ -0.37
PRPF40B-212ENST00000551111 FRYLO94915 3013 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 GVINP1Q7Z2Y8 2422 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 PP2D1A8MPX8 630 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 PROB1E7EW31 1015 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 ST18O60284 1047 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 PRKCBP05771 671 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 OR52Z1P0C646 297 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 AOC1P19801 751 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 TOB1P50616 345 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 PRPF4BQ13523 1007 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 GLRA4Q5JXX5 417 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 POTEHQ6S545 545 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 RSPO2Q6UXX9 243 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 GET4Q7L5D6 327 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 FRMD5Q7Z6J6 570 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 CEP57Q86XR8 500 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 TMEM130Q8N3G9 435 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 CEP120Q8N960 986 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 C8orf76Q96K31 380 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 KIF2CQ99661 725 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 RHOBTB2Q9BYZ6 727 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 PRKD2Q9BZL6 878 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 PLEKHA4Q9H4M7 779 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 GOLGA2P5Q9HBQ8 144 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 IGSF9Q9P2J2 1179 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 EPS15L1Q9UBC2 864 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 FBXL21Q9UKT6 434 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 SSX2IPQ9Y2D8 614 aa12.76□□□□□ -0.37
PRPF40B-212ENST00000551111 ARHGEF35A5YM69 484 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 PRR23AA6NEV1 266 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 I3L4J1 428 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 ACKR2O00590 384 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 NR1I2O75469 434 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 ZMYND10O75800 440 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 THP07101 528 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 NEFLP07196 543 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 LAMP2P13473 410 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 CDC25AP30304 524 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 NBL1P41271 181 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 IL17AQ16552 155 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 MAPK6Q16659 721 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms