RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 TNFSF13BQ9Y275 285 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 FNDC1Q4ZHG4 1894 aaPredicted RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 SF3B1O75533 1304 aaKnown RBP eCLIP10.31□□□□□ -0.76
YBX3-218ENST00000546298 UNC80Q8N2C7 3258 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 C2CD4DB7Z1M9 353 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 E9PMD0 336 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 TEX28O15482 410 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 SLC26A4O43511 780 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 RECQL4O94761 1208 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 EFEMP2O95967 443 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 BMP15O95972 392 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 WEE2P0C1S8 567 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 SP100P23497 879 aaPredicted RBP10.3□□□□□ -0.76
YBX3-218ENST00000546298 SMTNP53814 917 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 YARSP54577 528 aaKnown RBP10.3□□□□□ -0.76
YBX3-218ENST00000546298 PEX3P56589 373 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 ZRSR1Q15695 479 aaKnown RBP10.3□□□□□ -0.76
YBX3-218ENST00000546298 ATF7IP2Q5U623 682 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 RINT1Q6NUQ1 792 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 PDXDC1Q6P996 788 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 TMC5Q6UXY8 1006 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 TAS1R1Q7RTX1 841 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 UBALD2Q8IYN6 164 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 ZDHHC14Q8IZN3 488 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 RIN2Q8WYP3 895 aaPredicted RBP10.3□□□□□ -0.76
YBX3-218ENST00000546298 PRRX2Q99811 253 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 KIFC3Q9BVG8 833 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 MRPL4Q9BYD3 311 aaKnown RBP10.3□□□□□ -0.76
YBX3-218ENST00000546298 PLEKHA4Q9H4M7 779 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 TOPORSQ9NS56 1045 aaPredicted RBP10.3□□□□□ -0.76
YBX3-218ENST00000546298 FNIP2Q9P278 1114 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 SORCS3Q9UPU3 1222 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 LOXHD1Q8IVV2 1947 aa10.3□□□□□ -0.76
YBX3-218ENST00000546298 VWA3AA6NCI4 1184 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 CASTOR2A6NHX0 329 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 TTLL13PA6NNM8 815 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 PP2D1A8MPX8 630 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 HIP1RO75146 1068 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 GUCY2CP25092 1073 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 CDC25AP30304 524 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 NPTX2P47972 431 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 MTMR3Q13615 1198 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 IL17AQ16552 155 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 HYIQ5T013 277 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 NT5DC1Q5TFE4 455 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 EEF1DP3Q658K8 133 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 KANK3Q6NY19 840 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 C1orf186Q6ZWK4 172 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 FBXL6Q8N531 539 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 KREMEN2Q8NCW0 462 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 STAMQ92783 540 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 AK8Q96MA6 479 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 TBC1D32Q96NH3 1257 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 TCHPQ9BT92 498 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 TTPALQ9BTX7 342 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 MMTAG2Q9BU76 263 aaKnown RBP10.29□□□□□ -0.76
YBX3-218ENST00000546298 CCDC94Q9BW85 323 aaPredicted RBP10.29□□□□□ -0.76
YBX3-218ENST00000546298 RHOBTB2Q9BYZ6 727 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 GPR62Q9BZJ7 368 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 POLD4Q9HCU8 107 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 KMT5AQ9NQR1 393 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 MAN1C1Q9NR34 630 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 KCND2Q9NZV8 630 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 CDH22Q9UJ99 828 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 GDAQ9Y2T3 454 aa10.29□□□□□ -0.76
YBX3-218ENST00000546298 TRANK1O15050 2925 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 CCDC195A0A1B0GUA6 201 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 H0YCG3 227 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 PTGESO14684 152 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 TRAPPC3O43617 180 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 PDCP20941 246 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 KCNA4P22459 653 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 GRM5P41594 1212 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 STRN3Q13033 797 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 ZNF568Q3ZCX4 644 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 FAM171A1Q5VUB5 890 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 DCLRE1AQ6PJP8 1040 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 BRAPQ7Z569 592 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 CEP57Q86XR8 500 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 PALB2Q86YC2 1186 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 SYT2Q8N9I0 419 aaPredicted RBP10.28□□□□□ -0.76
YBX3-218ENST00000546298 SPIRE2Q8WWL2 714 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 PIK3R5Q8WYR1 880 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 CALML4Q96GE6 196 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
YBX3-218ENST00000546298 UROC1Q96N76 676 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 ACO2Q99798 780 aaKnown RBP10.28□□□□□ -0.76
YBX3-218ENST00000546298 NTPCRQ9BSD7 190 aaKnown RBP10.28□□□□□ -0.76
YBX3-218ENST00000546298 RUSC1Q9BVN2 902 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 PIDD1Q9HB75 910 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 SLC38A7Q9NVC3 462 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 ZDHHC7Q9NXF8 308 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 LARSQ9P2J5 1176 aaKnown RBP10.28□□□□□ -0.76
YBX3-218ENST00000546298 ARHGAP28Q9P2N2 729 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 LIMD1Q9UGP4 676 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 USP20Q9Y2K6 914 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 BDP1A6H8Y1 2624 aa10.28□□□□□ -0.76
YBX3-218ENST00000546298 F8W810 466 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 TMEM189-UBE2V1I3L0A0 370 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 B3GAT3O94766 335 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms