RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 RMDN1Q96DB5 314 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 PARVAQ9NVD7 372 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 NDUFA13Q9P0J0 144 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 PHF2O75151 1096 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 PRUNE1Q86TP1 453 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 NLRP14Q86W24 1093 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 HDDC3Q8N4P3 179 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 PYROXD1Q8WU10 500 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 CCDC138Q96M89 665 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 EPN3Q9H201 632 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 C11orf49Q9H6J7 331 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 UTYO14607 1347 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 CAND2O75155 1236 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 CYP21A2P08686 494 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 CPB1P15086 417 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 PLCG1P19174 1290 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 GYG1P46976 350 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 ALDH1A3P47895 512 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 PURAQ00577 322 aaKnown RBP8.28□□□□□ -1.08
VPS13D-211ENST00000543710 BTG3Q14201 252 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-211ENST00000543710 FBXW10Q5XX13 1052 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 RNF139Q8WU17 664 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 PBXIP1Q96AQ6 731 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 OPTNQ96CV9 577 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 DEFB118Q96PH6 123 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 TSC22D3Q99576 134 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 PLEKHA5Q9HAU0 1116 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 UBE2TQ9NPD8 197 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-211ENST00000543710 PALD1Q9ULE6 856 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 USP18Q9UMW8 372 aa8.28□□□□□ -1.08
VPS13D-211ENST00000543710 FRMPD2Q68DX3 1309 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-211ENST00000543710 RRN3P2A6NIE6 340 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 GNGT2O14610 69 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 ARHGEF9O43307 516 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 IL18RAPO95256 599 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 BAG2O95816 211 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 EFNA5P52803 228 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 ATP2C1P98194 919 aaPredicted RBP8.27□□□□□ -1.08
VPS13D-211ENST00000543710 SNX17Q15036 470 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 RARS2Q5T160 578 aaKnown RBP8.27□□□□□ -1.08
VPS13D-211ENST00000543710 SIX6OS1Q8N1H7 587 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 ZNF784Q8NCA9 323 aaPredicted RBP8.27□□□□□ -1.08
VPS13D-211ENST00000543710 DTX3LQ8TDB6 740 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 NDEL1Q9GZM8 345 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 NMRK2Q9NPI5 230 aa8.27□□□□□ -1.08
VPS13D-211ENST00000543710 DBR1Q9UK59 544 aaKnown RBP8.27□□□□□ -1.08
VPS13D-211ENST00000543710 BTBD18B2RXH4 712 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 H3BRJ5 948 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 H7C4K7 107 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 INO80B-WBP1J3KQ70 363 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 ITIH2P19823 946 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 GTF2H1P32780 548 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 GPC3P51654 580 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 HMGCS2P54868 508 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 NAA20P61599 178 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 INPP5AQ14642 412 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 KIAA1755Q5JYT7 1200 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 RASIP1Q5U651 963 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 RASSF3Q86WH2 238 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 ENAHQ8N8S7 591 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 TMEM35BQ8NCS4 154 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 CHST13Q8NET6 341 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 OR9Q1Q8NGQ5 310 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 CEP19Q96LK0 163 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SH3GL3Q99963 347 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 MRPL9Q9BYD2 267 aaKnown RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 WWP1Q9H0M0 922 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 ABCB6Q9NP58 842 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 KCND1Q9NSA2 647 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 BARHL2Q9NY43 387 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SRRM3A6NNA2 597 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 HNRNPDLO14979 420 aaKnown RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 TLL1O43897 1013 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 GDF11O95390 407 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 ZBED1O96006 694 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 MMEP08473 750 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 ACADMP11310 421 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 ABCB4P21439 1286 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 IFT88Q13099 833 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 DPCR1Q3MIW9 517 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 RHOT1Q8IXI2 618 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SCYL3Q8IZE3 742 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 MMGT1Q8N4V1 131 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 RFFLQ8WZ73 363 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SGSM3Q96HU1 749 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 FAR2Q96K12 515 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 INTS2Q9H0H0 1204 aaKnown RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 XPNPEP3Q9NQH7 507 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SEPT10Q9P0V9 454 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 C16orf96A6NNT2 1141 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 PIK3R2O00459 728 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 NDUFS2O75306 463 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 TADA2AO75478 443 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 CYP2E1P05181 493 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 CDH2P19022 906 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 EEF1DP29692 281 aaKnown RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 RXRGP48443 463 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 COPS2P61201 443 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 MESDQ14696 234 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms