RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 GPD1LQ8N335 351 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 CPA5Q8WXQ8 436 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 HAS1Q92839 578 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 ANKRD36BP1Q96IX9 119 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SEMA4AQ9H3S1 761 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 QTRT2Q9H974 415 aaKnown RBP8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 IP6K2Q9UHH9 426 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 DDX20Q9UHI6 824 aaKnown RBP8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 PPP1R9AQ9ULJ8 1098 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 PCDHA10Q9Y5I2 948 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 UBE4BO95155 1302 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 NID2Q14112 1375 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 MED7O43513 233 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 TNFRSF8P28908 595 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 ELF1P32519 619 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 FNTAP49354 379 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 PDIA2Q13087 525 aaKnown RBP8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 FAM160B1Q5W0V3 765 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SWSAP1Q6NVH7 229 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 CYFIP1Q7L576 1253 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 PCGF5Q86SE9 256 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 TTC17Q96AE7 1141 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 ATP6V0A4Q9HBG4 840 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SPATS2LQ9NUQ6 558 aaKnown RBP8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 SENP1Q9P0U3 644 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 PCDHB2Q9Y5E7 798 aa8.73□□□□□ -1.01
PRKAB1-207ENST00000542698 CALB1P05937 261 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 GZMAP12544 262 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 TBXAS1P24557 533 aaPredicted RBP8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 SCTRP47872 440 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 ARSEP51690 589 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 OSTNP61366 133 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 GRIK5Q16478 980 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 MREGQ8N565 214 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 CDKL2Q92772 493 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 OSBPL8Q9BZF1 889 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 TMEM117Q9H0C3 514 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 ZFP69BQ9UJL9 534 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 KRT37O76014 449 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 SRGAP2CP0DJJ0 459 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 IL1R1P14778 569 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 PRKCIP41743 596 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 LMBRD2Q68DH5 695 aaPredicted RBP8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 CD302Q8IX05 232 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 SMC1BQ8NDV3 1235 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 CYP2W1Q8TAV3 490 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 SERPINB12Q96P63 405 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 INPP4AQ96PE3 977 aaPredicted RBP8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 TIPINQ9BVW5 301 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 TTYH3Q9C0H2 523 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 TRABDQ9H4I3 376 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 PI4K2BG5E9Z4 385 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 ENTPD3O75355 529 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 CNGA1P29973 690 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 ITGA8P53708 1063 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 IRX4P78413 519 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 EPC2Q52LR7 807 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 BTNL9Q6UXG8 535 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 SCARA5Q6ZMJ2 495 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 KCNV2Q8TDN2 545 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 EPS8L3Q8TE67 593 aaKnown RBP8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 MXRA8Q9BRK3 442 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 ADPGKQ9BRR6 497 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 ADAM33Q9BZ11 813 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 PARVAQ9NVD7 372 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 STOML1Q9UBI4 398 aa8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 AGO2Q9UKV8 859 aaKnown RBP8.72□□□□□ -1.01
PRKAB1-207ENST00000542698 LTN1O94822 1766 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 SPATA31A6Q5VVP1 1343 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 FAM47DPA6NHR8 397 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 FANCGO15287 622 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 C21orf2O43822 256 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 DIAPH2O60879 1101 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 SURF1Q15526 300 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 Q4G0T1 1027 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 SPATA24Q86W54 205 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 TRIM50Q86XT4 487 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 ZNF354CQ86Y25 554 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 THNSL1Q8IYQ7 743 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 NSUN6Q8TEA1 469 aaKnown RBP8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 FAM129AQ9BZQ8 928 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 KCNH7Q9NS40 1196 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 NEU2Q9Y3R4 380 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 CAMTA1Q9Y6Y1 1673 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 TRAPPC3O43617 180 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 SGPL1O95470 568 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 CPP00450 1065 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 PSMC4P43686 418 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 CASP5P51878 434 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 SLC12A3P55017 1021 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 KLHL38Q2WGJ6 581 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 P3H1Q32P28 736 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 SUGP1Q8IWZ8 645 aaKnown RBP8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 MAML1Q92585 1016 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 CBWD1Q9BRT8 395 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 PAGR1Q9BTK6 254 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 NOD2Q9HC29 1040 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 TMEM8AQ9HCN3 771 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 RBAKQ9NYW8 714 aaPredicted RBP8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 SCOCQ9UIL1 159 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms