RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 ECHDC2Q86YB7 292 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 NPAS4Q8IUM7 802 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 LINC01599Q8WXQ3 324 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 TOP1MTQ969P6 601 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 PGBD4Q96DM1 585 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 CPB2Q96IY4 423 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 TSPAN18Q96SJ8 248 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 TCHPQ9BT92 498 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 KIAA1586Q9HCI6 787 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 TMEM161AQ9NX61 479 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 DACH1Q9UI36 760 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 PCDHB2Q9Y5E7 798 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 PCDHGA10Q9Y5H3 936 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 SIP14410 1827 aa12.92□□□□□ -0.34
CYB561A3-214ENST00000540139 BICDL2A1A5D9 508 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 PPP1R3GB7ZBB8 358 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 INPPL1O15357 1258 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 CALUO43852 315 aaPredicted RBP12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 LDHAP00338 332 aaKnown RBP12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 RPL13P26373 211 aaKnown RBP12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 ERCC5P28715 1186 aaPredicted RBP12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 ADSSP30520 456 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 GRM5P41594 1212 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 KCNJ6P48051 423 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 WDR5P61964 334 aaKnown RBP12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 LRRC63Q05C16 580 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 TCTN1Q2MV58 587 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 ZNF568Q3ZCX4 644 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 ZCWPW2Q504Y3 356 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 EEF1DP3Q658K8 133 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 SLC39A4Q6P5W5 647 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 SASS6Q6UVJ0 657 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 TTC13Q8NBP0 860 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 FBXL18Q96ME1 805 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 SLC9A7Q96T83 725 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 TRIM6Q9C030 488 aaPredicted RBP12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 UBE2OQ9C0C9 1292 aaKnown RBP12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 CDT1Q9H211 546 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 PRO3102Q9H379 93 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 AGPAT3Q9NRZ7 376 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 ANO10Q9NW15 660 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 DMAC2Q9NW81 257 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 GIT1Q9Y2X7 761 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.91□□□□□ -0.34
CYB561A3-214ENST00000540139 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 ANKRD63C9JTQ0 380 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 BIN1O00499 593 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 OGTO15294 1046 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 ADRB2P07550 413 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 CLTAP09496 248 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 CCNE1P24864 410 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 OTOP2Q7RTS6 562 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 CD302Q8IX05 232 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 NELFCDQ8IXH7 590 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 POMGNT1Q8WZA1 660 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 ZBTB45Q96K62 511 aaPredicted RBP12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 EIF2AQ9BY44 585 aaKnown RBP12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 ALG2Q9H553 416 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 PLEKHA5Q9HAU0 1116 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 AGO2Q9UKV8 859 aaKnown RBP12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 IPPQ9Y573 584 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 SLC4A7Q9Y6M7 1214 aa12.9□□□□□ -0.34
CYB561A3-214ENST00000540139 MICAL3Q7RTP6 2002 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 MAPK13O15264 365 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 EXTL3O43909 919 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 FAM189A1O60320 539 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 NPTXRO95502 500 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 CAVIN2O95810 425 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 ITGA4P13612 1032 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 ATF7P17544 494 aaPredicted RBP12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 MCCD1P59942 119 aaPredicted RBP12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 FKBP3Q00688 224 aaKnown RBP12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 ENPEPQ07075 957 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 PAK1Q13153 545 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 SHHQ15465 462 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 STX1AQ16623 288 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 XKR4Q5GH76 650 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 ARMCX5Q6P1M9 558 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.89□□□□□ -0.351e-17■■■■■ 33.5
CYB561A3-214ENST00000540139 ZC3H3Q8IXZ2 948 aaKnown RBP12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 SMYD4Q8IYR2 804 aaPredicted RBP12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 SMG8Q8ND04 991 aaKnown RBP12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 P2RX5Q93086 422 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 ACAP3Q96P50 834 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 TSG101Q99816 390 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 MSTO1Q9BUK6 570 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 SEMA6BQ9H3T3 888 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 TOPORSQ9NS56 1045 aaPredicted RBP12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 MAPK8IP1Q9UQF2 711 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 USP20Q9Y2K6 914 aa12.89□□□□□ -0.35
CYB561A3-214ENST00000540139 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
CYB561A3-214ENST00000540139 CD46P15529 392 aa12.88□□□□□ -0.35
CYB561A3-214ENST00000540139 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
CYB561A3-214ENST00000540139 ISM2Q6H9L7 571 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms