RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 NDST4Q9H3R1 872 aa12.43□□□□□ -0.42
FAM60A-206ENST00000539409 HIPK3Q9H422 1215 aa12.43□□□□□ -0.42
FAM60A-206ENST00000539409 RBAKQ9NYW8 714 aaPredicted RBP12.43□□□□□ -0.42
FAM60A-206ENST00000539409 NPTXRO95502 500 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 TPM2P07951 284 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 TRIM49P0CI25 452 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 TRIM49CP0CI26 452 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 KRT13P13646 458 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 VAMP7P51809 220 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 WNT7BP56706 349 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 DLG4P78352 724 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 PPP2R3AQ06190 1150 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 PTPN21Q16825 1174 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 C1orf220Q5T0J3 134 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 TCERG1LQ5VWI1 586 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 BRSK2Q8IWQ3 736 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 TMEM192Q8IY95 271 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 PARD3BQ8TEW8 1205 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 TMX1Q9H3N1 280 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 ANK1P16157 1881 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 PES1O00541 588 aaKnown RBP12.42□□□□□ -0.42
FAM60A-206ENST00000539409 TPM3P06753 285 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 STAG3L1P0CL83 205 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 OSTNP61366 133 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 ENPEPQ07075 957 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 KCNH2Q12809 1159 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 GPNMBQ14956 572 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 PSMD6Q15008 389 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 ENOX2Q16206 610 aaKnown RBP12.42□□□□□ -0.42
FAM60A-206ENST00000539409 APBB1IPQ7Z5R6 666 aaPredicted RBP12.42□□□□□ -0.42
FAM60A-206ENST00000539409 CCDC127Q96BQ5 260 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 WNT8AQ9H1J5 351 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 CHST12Q9NRB3 414 aa12.42□□□□□ -0.42
FAM60A-206ENST00000539409 MEFVO15553 781 aaPredicted RBP12.41□□□□□ -0.42
FAM60A-206ENST00000539409 NBNO60934 754 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 AFPP02771 609 aaKnown RBP12.41□□□□□ -0.42
FAM60A-206ENST00000539409 CLTBP09497 229 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 UBXN1Q04323 297 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 TWF2Q6IBS0 349 aaKnown RBP12.41□□□□□ -0.42
FAM60A-206ENST00000539409 TMC2Q8TDI7 906 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 ANP32BQ92688 251 aaKnown RBP12.41□□□□□ -0.42
FAM60A-206ENST00000539409 IFIH1Q9BYX4 1025 aaKnown RBP12.41□□□□□ -0.42
FAM60A-206ENST00000539409 NXF3Q9H4D5 531 aaKnown RBP12.41□□□□□ -0.42
FAM60A-206ENST00000539409 RNF216Q9NWF9 866 aaPredicted RBP12.41□□□□□ -0.42
FAM60A-206ENST00000539409 RALGAPA2Q2PPJ7 1873 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 LRRIQ3A6PVS8 624 aaPredicted RBP12.41□□□□□ -0.42
FAM60A-206ENST00000539409 MGEA5O60502 916 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 CLTAP09496 248 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 CXCL8P10145 99 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 CDC25BP30305 580 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 PBX1P40424 430 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 GRM5P41594 1212 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 DSC3Q14574 896 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 KYAT1Q16773 422 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 PPP1R12CQ9BZL4 782 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 TRIM6Q9C030 488 aaPredicted RBP12.41□□□□□ -0.42
FAM60A-206ENST00000539409 PDE11AQ9HCR9 933 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 SCN5AQ14524 2016 aa12.41□□□□□ -0.42
FAM60A-206ENST00000539409 ALPK3Q96L96 1907 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
FAM60A-206ENST00000539409 CYP2C18P33260 490 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 CLDN10P78369 228 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 PPP3CAQ08209 521 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 USP37Q86T82 979 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 PDLIM2Q96JY6 352 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 POP1Q99575 1024 aaKnown RBP12.4□□□□□ -0.42
FAM60A-206ENST00000539409 TOPORSQ9NS56 1045 aaPredicted RBP12.4□□□□□ -0.42
FAM60A-206ENST00000539409 TMEM39AQ9NV64 488 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 HES2Q9Y543 173 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 PTPRJQ12913 1337 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 TULP1O00294 542 aaPredicted RBP12.4□□□□□ -0.42
FAM60A-206ENST00000539409 POU5F1Q01860 360 aaKnown RBP12.4□□□□□ -0.42
FAM60A-206ENST00000539409 CBWD6Q4V339 395 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 CBWD3Q5JTY5 395 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 CBWD5Q5RIA9 395 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 FKBP15Q5T1M5 1219 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
FAM60A-206ENST00000539409 VSTM4Q8IW00 320 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 SMG8Q8ND04 991 aaKnown RBP12.4□□□□□ -0.42
FAM60A-206ENST00000539409 SCLYQ96I15 445 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 RPF1Q9H9Y2 349 aaKnown RBP12.4□□□□□ -0.42
FAM60A-206ENST00000539409 IPPQ9Y573 584 aa12.4□□□□□ -0.42
FAM60A-206ENST00000539409 CITO14578 2027 aa12.4□□□□□ -0.43
FAM60A-206ENST00000539409 FMO5P49326 533 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 CCL23P55773 120 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 PLEKHG4Q58EX7 1191 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 FAM84AQ96KN4 292 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 ACAP3Q96P50 834 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 ERGIC2Q96RQ1 377 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 CCDC94Q9BW85 323 aaPredicted RBP12.39□□□□□ -0.43
FAM60A-206ENST00000539409 TRAIPQ9BWF2 469 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 MMRN2Q9H8L6 949 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 FAM105AQ9NUU6 356 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 SNTG2Q9NY99 539 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 PCDHB2Q9Y5E7 798 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 A0A1W2PQC6 194 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 TTC26A0AVF1 554 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 ZSCAN20P17040 1043 aaPredicted RBP12.39□□□□□ -0.43
FAM60A-206ENST00000539409 GCLMP48507 274 aa12.39□□□□□ -0.43
FAM60A-206ENST00000539409 SLC10A6Q3KNW5 377 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms