RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 XRRA1Q6P2D8 792 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 ELP3Q9H9T3 547 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 AGPAT5Q9NUQ2 364 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 AGO2Q9UKV8 859 aaKnown RBP17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 HOXD10P28358 340 aa17.14■□□□□ 0.34
HMGXB3-202ENST00000503427 ARFIP2P53365 341 aa17.14■□□□□ 0.34
HMGXB3-202ENST00000503427 PDIA2Q13087 525 aaKnown RBP17.14■□□□□ 0.34
HMGXB3-202ENST00000503427 ANGEL2Q5VTE6 544 aaKnown RBP17.14■□□□□ 0.34
HMGXB3-202ENST00000503427 PARP9Q8IXQ6 854 aa17.14■□□□□ 0.34
HMGXB3-202ENST00000503427 THEM5Q8N1Q8 247 aa17.14■□□□□ 0.34
HMGXB3-202ENST00000503427 DONSONQ9NYP3 566 aa17.14■□□□□ 0.34
HMGXB3-202ENST00000503427 HEY1Q9Y5J3 304 aa17.14■□□□□ 0.34
HMGXB3-202ENST00000503427 GSTA4O15217 222 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 MAFGO15525 162 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 MYCP01106 439 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 SLC1A1P43005 524 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 STAT4Q14765 748 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 IZUMO3Q5VZ72 239 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 NYAP1Q6ZVC0 841 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 DAGLBQ8NCG7 672 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 RIT2Q99578 217 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 STK33Q9BYT3 514 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 ETNK1Q9HBU6 452 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 RBAKQ9NYW8 714 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 KLHL8Q9P2G9 620 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 PXDNQ92626 1479 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 SDC4P31431 198 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 OCRLQ01968 901 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 SYDE1Q6ZW31 735 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 PIP4K2CQ8TBX8 421 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 EPN3Q9H201 632 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 SENP1Q9P0U3 644 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 A0A1W2PQJ5 194 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 AGTP01019 485 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 NR3C2P08235 984 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 HSPA9P38646 679 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 GMPSP49915 693 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 TAP1Q03518 808 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 KIAA1755Q5JYT7 1200 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 MFSD14CQ5VZR4 134 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 ZC3H18Q86VM9 953 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 ZBED8Q8IZ13 594 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 SAAL1Q96ER3 474 aa17.14■□□□□ 0.33
HMGXB3-202ENST00000503427 MMP14P50281 582 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 LRRC43Q8N309 656 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 PPM1NQ8N819 430 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 TRIM15Q9C019 465 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 MEFVO15553 781 aaPredicted RBP17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 TXNP10599 105 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 KLRK1P26718 216 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 PSMC1P62191 440 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 STK4Q13043 487 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 SRLQ86TD4 932 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 C1orf54Q8WWF1 131 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 HPS3Q969F9 1004 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 ECT2Q9H8V3 914 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 GGA3Q9NZ52 723 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 ARHGAP23Q9P227 1491 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 APOEP02649 317 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 CDR2Q01850 454 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 KRT17Q04695 432 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 ATL2Q8NHH9 583 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 COL5A2P05997 1499 aaPredicted RBP17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 GYPCP04921 128 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 PMLP29590 882 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■□ 24.4
HMGXB3-202ENST00000503427 LRRC14Q15048 493 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 EDRF1Q3B7T1 1238 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 USP49Q70CQ1 688 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 TSC22D3Q99576 134 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 PARVAQ9NVD7 372 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 HACL1Q9UJ83 578 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 MROH1Q8NDA8 1641 aa17.13■□□□□ 0.33
HMGXB3-202ENST00000503427 ARPP19P56211 112 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 NCAPHQ15003 741 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 DUOXA2Q1HG44 320 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 ACAD11Q709F0 780 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 CIITAP33076 1130 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 CDC42EP1Q00587 391 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 DCTN4Q9UJW0 460 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 KRT10P13645 584 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 UCHL3P15374 230 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 COPS2P61201 443 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 SNAPC2Q13487 334 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 SLC12A1Q13621 1099 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 C1orf146Q5VVC0 180 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 ZDHHC15Q96MV8 337 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 UVRAGQ9P2Y5 699 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 APEX2Q9UBZ4 518 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 PCSK1NQ9UHG2 260 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 BCL9O00512 1426 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 EIF3HO15372 352 aaKnown RBP eCLIP17.12■□□□□ 0.332e-6■■■■■ 28.7
HMGXB3-202ENST00000503427 SLC25A27O95847 323 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 NMT1P30419 496 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 BIRC2Q13490 618 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 TRIML2Q8N7C3 387 aa17.12■□□□□ 0.33
HMGXB3-202ENST00000503427 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms