RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CAMK1Q14012 370 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 CCDC85BQ15834 202 aaPredicted RBP12.79□□□□□ -0.36
UBA3-211ENST00000493957 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 SEZ6Q53EL9 994 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 SLC39A4Q6P5W5 647 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 TMEM173Q86WV6 379 aaPredicted RBP12.79□□□□□ -0.36
UBA3-211ENST00000493957 FAM178BQ8IXR5 827 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 GSTCDQ8NEC7 633 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 MAFAQ8NHW3 353 aaPredicted RBP12.79□□□□□ -0.36
UBA3-211ENST00000493957 BCL7CQ8WUZ0 217 aaPredicted RBP12.79□□□□□ -0.36
UBA3-211ENST00000493957 TRIM9Q9C026 710 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 TNMDQ9H2S6 317 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 CUEDC2Q9H467 287 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 PANK4Q9NVE7 773 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 PARP2Q9UGN5 583 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 TBX20Q9UMR3 447 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 GDAQ9Y2T3 454 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 PCDHGC5Q9Y5F6 944 aa12.79□□□□□ -0.36
UBA3-211ENST00000493957 PLXNA3P51805 1871 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 TCF20Q9UGU0 1960 aaKnown RBP12.78□□□□□ -0.36
UBA3-211ENST00000493957 ZC3H11AO75152 810 aaKnown RBP eCLIP12.78□□□□□ -0.36
UBA3-211ENST00000493957 PPP1R37O75864 691 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 RECQL4O94761 1208 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 MYBP10242 640 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 BCAR1P56945 870 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 OSTNP61366 133 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 ASIC1P78348 528 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 STRN3Q13033 797 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 COASYQ13057 564 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 CUL4BQ13620 913 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 DCAF4L1Q3SXM0 396 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 MPZL3Q6UWV2 235 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 CNNM3Q8NE01 707 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 SPPL3Q8TCT6 385 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 ADPGKQ9BRR6 497 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 MRPL9Q9BYD2 267 aaKnown RBP12.78□□□□□ -0.36
UBA3-211ENST00000493957 PRDM6Q9NQX0 595 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 RWDD3Q9Y3V2 267 aa12.78□□□□□ -0.36
UBA3-211ENST00000493957 FAM237AA0A1B0GTK4 181 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 A0A1W2PQ27 194 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 A0A1W2PQ64 194 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 A0A1W2PQD8 194 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 ANKRD63C9JTQ0 380 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 F8W810 466 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 PTGESO14684 152 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 INPPL1O15357 1258 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 FGF18O76093 207 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 RB1P06400 928 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 SLFN14P0C7P3 912 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 GAP43P17677 238 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 LAG3P18627 525 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 POU3F3P20264 500 aaPredicted RBP12.77□□□□□ -0.37
UBA3-211ENST00000493957 IRS1P35568 1242 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 SLC11A1P49279 550 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 GTF2BQ00403 316 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 RNASELQ05823 741 aaKnown RBP12.77□□□□□ -0.37
UBA3-211ENST00000493957 HERC4Q5GLZ8 1057 aaPredicted RBP12.77□□□□□ -0.37
UBA3-211ENST00000493957 ZBTB41Q5SVQ8 909 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 ZNF720Q7Z2F6 126 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 THNSL1Q8IYQ7 743 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 SLC39A11Q8N1S5 342 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 TMEM130Q8N3G9 435 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 URGCPQ8TCY9 931 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 MRPS27Q92552 414 aaKnown RBP12.77□□□□□ -0.37
UBA3-211ENST00000493957 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 KCNN1Q92952 543 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 P2RX5Q93086 422 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 BICD1Q96G01 975 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 PAGE5Q96GU1 130 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 ZNF558Q96NG5 402 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 C7orf25Q9BPX7 421 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 C11orf84Q9BUA3 381 aaPredicted RBP12.77□□□□□ -0.37
UBA3-211ENST00000493957 STRA6Q9BX79 667 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 PLVAPQ9BX97 442 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 MRPL44Q9H9J2 332 aaKnown RBP12.77□□□□□ -0.37
UBA3-211ENST00000493957 GIT1Q9Y2X7 761 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 SCN1AP35498 2009 aa12.77□□□□□ -0.37
UBA3-211ENST00000493957 H0YCG3 227 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 HNRNPDLO14979 420 aaKnown RBP12.76□□□□□ -0.37
UBA3-211ENST00000493957 GCNT3O95395 438 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 PIGRP01833 764 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 GALTP07902 379 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 TNFSF9P41273 254 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 SYKP43405 635 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
UBA3-211ENST00000493957 GLRA4Q5JXX5 417 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 CNNM4Q6P4Q7 775 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 ZPBP2Q6X784 338 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 MAP4K3Q8IVH8 894 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 CCDC65Q8IXS2 484 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 COLGALT2Q8IYK4 626 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 POF1BQ8WVV4 589 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 MRPL38Q96DV4 380 aaKnown RBP12.76□□□□□ -0.37
UBA3-211ENST00000493957 PAAF1Q9BRP4 392 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 TCHPQ9BT92 498 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 VN1R3Q9BXE9 311 aa12.76□□□□□ -0.37
UBA3-211ENST00000493957 ST6GALNAC4Q9H4F1 302 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms