RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	PAWR	Q96IZ0	340 aa	Known RBP	4.63	□□□□□ -1.67
VPS36-205	ENST00000492650	TEX101	Q9BY14	249 aa		4.63	□□□□□ -1.67
VPS36-205	ENST00000492650	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS36-205	ENST00000492650	MAPRE3	Q9UPY8	281 aa		4.63	□□□□□ -1.67
VPS36-205	ENST00000492650	USP15	Q9Y4E8	981 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS36-205	ENST00000492650	RPTOR	Q8N122	1335 aa		4.63	□□□□□ -1.67
VPS36-205	ENST00000492650	UNC119B	A6NIH7	251 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	AKR1B10	O60218	316 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	PHF2	O75151	1096 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	BPI	P17213	487 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	ADSL	P30566	484 aa	Predicted RBP	4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	BMPR1A	P36894	532 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	AVPR1B	P47901	424 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	ID4	P47928	161 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	CDK17	Q00537	523 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	DHCR24	Q15392	516 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	TAF7L	Q5H9L4	462 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	MFSD14B	Q5SR56	506 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	STRIP1	Q5VSL9	837 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	BTNL9	Q6UXG8	535 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	TTC1	Q99614	292 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	IFT22	Q9H7X7	185 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	DPP7	Q9UHL4	492 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	MAP3K2	Q9Y2U5	619 aa		4.62	□□□□□ -1.67
VPS36-205	ENST00000492650	NEMP1	O14524	444 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	KIAA0355	O15063	1070 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	ADCY6	O43306	1168 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	ULK1	O75385	1050 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	DDX6	P26196	483 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	CRHR1	P34998	444 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	SESN3	P58005	492 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	CCT2	P78371	535 aa	Known RBP	4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	MXRA7	P84157	204 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	STRN3	Q13033	797 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	FSCN1	Q16658	493 aa	Known RBP	4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	CLRN3	Q8NCR9	226 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	RAX2	Q96IS3	184 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	ACAP3	Q96P50	834 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	RNF181	Q9P0P0	153 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	PTGFRN	Q9P2B2	879 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	FPGT-TNNI3K	V9GXZ4	949 aa		4.61	□□□□□ -1.67
VPS36-205	ENST00000492650	DRGX	A6NNA5	263 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	GOLGA8A	A7E2F4	631 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	PPM1G	O15355	546 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	ZEB2	O60315	1214 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	HKR1	P10072	659 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	ENPP1	P22413	925 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	FLT3LG	P49771	235 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	CHN2	P52757	468 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	GYS2	P54840	703 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	PER3	P56645	1201 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	CLRN1	P58418	232 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	RAP2B	P61225	183 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	REST	Q13127	1097 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	FAM47A	Q5JRC9	791 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	FAM180A	Q6UWF9	173 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	UBR7	Q8N806	425 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	REPS2	Q8NFH8	660 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	FBXO18	Q8NFZ0	1043 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	SLC35B2	Q8TB61	432 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	RIN2	Q8WYP3	895 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	UHRF1	Q96T88	793 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	DKK2	Q9UBU2	259 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	ATP11B	Q9Y2G3	1177 aa		4.6	□□□□□ -1.67
VPS36-205	ENST00000492650	PIPSL	A2A3N6	862 aa		4.59	□□□□□ -1.67
VPS36-205	ENST00000492650	ENPP3	O14638	875 aa		4.59	□□□□□ -1.67
VPS36-205	ENST00000492650	TP53BP2	Q13625	1128 aa		4.59	□□□□□ -1.67
VPS36-205	ENST00000492650	GPR156	Q8NFN8	814 aa		4.59	□□□□□ -1.67
VPS36-205	ENST00000492650	TGFBRAP1	Q8WUH2	860 aa		4.59	□□□□□ -1.67
VPS36-205	ENST00000492650	AUTS2	Q8WXX7	1259 aa		4.59	□□□□□ -1.67
VPS36-205	ENST00000492650	QRSL1	Q9H0R6	528 aa	Known RBP	4.59	□□□□□ -1.67
VPS36-205	ENST00000492650	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS36-205	ENST00000492650	CXorf49	A8MYA2	514 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	PJA2	O43164	708 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	SPDEF	O95238	335 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	SNRPA1	P09661	255 aa	Known RBP	4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	ITGAM	P11215	1152 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	ECHS1	P30084	290 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	SCAND1	P57086	179 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	MRPS21	P82921	87 aa	Known RBP	4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	ERCC6L	Q2NKX8	1250 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	MST1L	Q2TV78	715 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	SPDYE7P	Q495Y7	208 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	ABHD17B	Q5VST6	288 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	TSHZ3	Q63HK5	1081 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	METRNL	Q641Q3	311 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	MED25	Q71SY5	747 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	RNF180	Q86T96	592 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	ADGRG3	Q86Y34	549 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	CMIP	Q8IY22	773 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	FATE1	Q969F0	183 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	COQ10A	Q96MF6	247 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	NEU1	Q99519	415 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	SYNPO2L	Q9H987	977 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	SYBU	Q9NX95	663 aa		4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	APOBEC2	Q9Y235	224 aa	Known RBP	4.58	□□□□□ -1.68
VPS36-205	ENST00000492650	COL11A2	P13942	1736 aa	Predicted RBP	4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms