RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-204	ENST00000478061	GSTCD	Q8NEC7	633 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	URGCP	Q8TCY9	931 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	ACAP3	Q96P50	834 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	MSTO1	Q9BUK6	570 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	CCDC94	Q9BW85	323 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	MRPL9	Q9BYD2	267 aa	Known RBP	13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	GBP3	Q9H0R5	595 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	CXCL16	Q9H2A7	254 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	CLSTN2	Q9H4D0	955 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	CWH43	Q9H720	699 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	TBC1D13	Q9NVG8	400 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	RMND1	Q9NWS8	449 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	MIOS	Q9NXC5	875 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	CHD9	Q3L8U1	2897 aa		13.98	□□□□□ -0.17
RBM28-204	ENST00000478061	GBF1	Q92538	1859 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	MEFV	O15553	781 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	TGFB1I1	O43294	461 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	CLTA	P09496	248 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	MCM4	P33991	863 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	SCNN1G	P51170	649 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	KNOP1	Q1ED39	458 aa	Known RBP	13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	ZNF697	Q5TEC3	545 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	POMGNT1	Q8WZA1	660 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	CBWD1	Q9BRT8	395 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	C17orf80	Q9BSJ5	609 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	SEMA6B	Q9H3T3	888 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	CERS4	Q9HA82	394 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	KANSL3	Q9P2N6	904 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	MAN1B1	Q9UKM7	699 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	AGO2	Q9UKV8	859 aa	Known RBP	13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	PLAGL2	Q9UPG8	496 aa		13.97	□□□□□ -0.17
RBM28-204	ENST00000478061	PTGES	O14684	152 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	B4GALT3	O60512	393 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	POMC	P01189	267 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	GART	P22102	1010 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	BMPR1A	P36894	532 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	TNFSF9	P41273	254 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	YARS	P54577	528 aa	Known RBP	13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	SNRPF	P62306	86 aa	Known RBP	13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	KYAT1	Q16773	422 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	SLC10A6	Q3KNW5	377 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	XKR4	Q5GH76	650 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	ALKAL1	Q6UXT8	129 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	ZNF280B	Q86YH2	543 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	ZSWIM2	Q8NEG5	633 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	SNX27	Q96L92	541 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	SAMD11	Q96NU1	681 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	KCTD10	Q9H3F6	313 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	NRDE2	Q9H7Z3	1164 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	AGPAT3	Q9NRZ7	376 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	MTUS1	Q9ULD2	1270 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	MAPK8IP1	Q9UQF2	711 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	CHD7	Q9P2D1	2997 aa		13.96	□□□□□ -0.17
RBM28-204	ENST00000478061	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	EPOP	A6NHQ4	379 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	DDHD2	O94830	711 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	CXCL8	P10145	99 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	LAG3	P18627	525 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	CTNNB1	P35222	781 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	ACOT2	P49753	483 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	RNASEL	Q05823	741 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	GRIK3	Q13003	919 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	GRIN2C	Q14957	1233 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	ENOX2	Q16206	610 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	EPC2	Q52LR7	807 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	SPOUT1	Q5T280	376 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	ARMCX5	Q6P1M9	558 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.95	□□□□□ -0.18
RBM28-204	ENST00000478061		Q7L0L9	218 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	HS2ST1	Q7LGA3	356 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	GUF1	Q8N442	669 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	COLGALT1	Q8NBJ5	622 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	ARNTL2	Q8WYA1	636 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	FAM161B	Q96MY7	647 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	RPS6KC1	Q96S38	1066 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	GTPBP4	Q9BZE4	634 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	NUP62CL	Q9H1M0	184 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	PCIF1	Q9H4Z3	704 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	KIAA1468	Q9P260	1216 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	CPSF3	Q9UKF6	684 aa	Known RBP	13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	RWDD3	Q9Y3V2	267 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	MYO9B	Q13459	2157 aa		13.95	□□□□□ -0.18
RBM28-204	ENST00000478061	SMIM28	A0A1B0GU29	152 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	TTC26	A0AVF1	554 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	GOLGA8IP	A6NC78	632 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	GOLGA8J	A6NMD2	632 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	C5orf67	F2Z3F1	127 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	BIN1	O00499	593 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	KIAA0391	O15091	583 aa	Known RBP	13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	CLIC2	O15247	247 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	EXTL3	O43909	919 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	KIF20A	O95235	890 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	MBD3	O95983	291 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	ADRB2	P07550	413 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	KCNE1	P15382	129 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	BMP6	P22004	513 aa		13.94	□□□□□ -0.18
RBM28-204	ENST00000478061	PBX3	P40426	434 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms