RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 OTOP3Q7RTS5 596 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 ZBTB8OSQ8IWT0 167 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 HACE1Q8IYU2 909 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 MCPH1Q8NEM0 835 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 POLR3CQ9BUI4 534 aaPredicted RBP12.89□□□□□ -0.35
VARS2-208ENST00000477052 PRMT7Q9NVM4 692 aaPredicted RBP12.89□□□□□ -0.35
VARS2-208ENST00000477052 CLUHO75153 1309 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 ZFHX2Q9C0A1 2572 aaPredicted RBP12.88□□□□□ -0.35
VARS2-208ENST00000477052 ADAM12O43184 909 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
VARS2-208ENST00000477052 CFHP08603 1231 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 NPR3P17342 541 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 CYP11B2P19099 503 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 RPA1P27694 616 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 NTHL1P78549 312 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 TDGQ13569 410 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
VARS2-208ENST00000477052 USP41Q3LFD5 358 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 GLRA4Q5JXX5 417 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 NT5DC1Q5TFE4 455 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 FAM171A1Q5VUB5 890 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 CWF19L1Q69YN2 538 aaKnown RBP12.88□□□□□ -0.35
VARS2-208ENST00000477052 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
VARS2-208ENST00000477052 C15orf39Q6ZRI6 1047 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 SIX5Q8N196 739 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 C4orf32Q8N8J7 132 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 ERMNQ8TAM6 284 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 DEPTORQ8TB45 409 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 KIF2CQ99661 725 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 PRRX2Q99811 253 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 CCDC113Q9H0I3 377 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 NT5C3AQ9H0P0 336 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 BHMT2Q9H2M3 363 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 PIDD1Q9HB75 910 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 WDR6Q9NNW5 1121 aaKnown RBP12.88□□□□□ -0.35
VARS2-208ENST00000477052 STK39Q9UEW8 545 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 FBXL21Q9UKT6 434 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 KIAA1024Q9UPX6 916 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 SSX2IPQ9Y2D8 614 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 CACNA1HO95180 2353 aa12.88□□□□□ -0.35
VARS2-208ENST00000477052 N4BP3O15049 544 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 GFRA3O60609 400 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 CDC25AP30304 524 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 TOB1P50616 345 aaPredicted RBP12.87□□□□□ -0.35
VARS2-208ENST00000477052 TUSC3Q13454 348 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 NAB2Q15742 525 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 MAPK6Q16659 721 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 FAM187BQ17R55 369 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 LILRA6Q6PI73 481 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 GET4Q7L5D6 327 aaPredicted RBP12.87□□□□□ -0.35
VARS2-208ENST00000477052 CMASQ8NFW8 434 aaPredicted RBP12.87□□□□□ -0.35
VARS2-208ENST00000477052 FBXO18Q8NFZ0 1043 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 CLSTN3Q9BQT9 956 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 FOXP1Q9H334 677 aaPredicted RBP12.87□□□□□ -0.35
VARS2-208ENST00000477052 GOLGA2P5Q9HBQ8 144 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 DDX19AQ9NUU7 478 aaKnown RBP12.87□□□□□ -0.35
VARS2-208ENST00000477052 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 CA14Q9ULX7 337 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 DOCK6Q96HP0 2047 aa12.87□□□□□ -0.35
VARS2-208ENST00000477052 E9PMD0 336 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 I3L4J1 428 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 ACKR2O00590 384 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 THP07101 528 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 NAMPTP43490 491 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
VARS2-208ENST00000477052 OSTNP61366 133 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 IL17AQ16552 155 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 SLC44A3Q8N4M1 653 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 CEP120Q8N960 986 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 FAM184AQ8NB25 1140 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 PRIMPOLQ96LW4 560 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 LLPHQ9BRT6 129 aaKnown RBP12.86□□□□□ -0.35
VARS2-208ENST00000477052 C2orf40Q9H1Z8 148 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 DUSP12Q9UNI6 340 aa12.86□□□□□ -0.35
VARS2-208ENST00000477052 SF3B1O75533 1304 aaKnown RBP eCLIP12.86□□□□□ -0.35
VARS2-208ENST00000477052 MYO15AQ9UKN7 3530 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 KRBA1A5PL33 1030 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 STK25O00506 426 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 CCL16O15467 120 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 PTGDRQ13258 359 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 ZRSR1Q15695 479 aaKnown RBP12.85□□□□□ -0.35
VARS2-208ENST00000477052 PSMD5Q16401 504 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 ATF7IP2Q5U623 682 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 RSPO2Q6UXX9 243 aaPredicted RBP12.85□□□□□ -0.35
VARS2-208ENST00000477052 ASCL5Q7RTU5 278 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 KCNK18Q7Z418 384 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 GRASPQ7Z6J2 395 aaPredicted RBP12.85□□□□□ -0.35
VARS2-208ENST00000477052 TMEM130Q8N3G9 435 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 LNX1Q8TBB1 728 aaPredicted RBP12.85□□□□□ -0.35
VARS2-208ENST00000477052 SNX29Q8TEQ0 813 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 PLIN2Q99541 437 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 TTPALQ9BTX7 342 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 RPP25Q9BUL9 199 aaKnown RBP12.85□□□□□ -0.35
VARS2-208ENST00000477052 RUSC1Q9BVN2 902 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 PRKD2Q9BZL6 878 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 FNIP2Q9P278 1114 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 POLIQ9UNA4 740 aa12.85□□□□□ -0.35
VARS2-208ENST00000477052 VWA8A3KMH1 1905 aa12.84□□□□□ -0.35
VARS2-208ENST00000477052 MTCL1Q9Y4B5 1905 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms