RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TMX3Q96JJ7 454 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 GPHA2Q96T91 129 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 SLC6A15Q9H2J7 730 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 LANCL2Q9NS86 450 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 KLHL11Q9NVR0 708 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 CALCOCO1Q9P1Z2 691 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 PCDHA3Q9Y5H8 950 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 COMMD10Q9Y6G5 202 aa7.51□□□□□ -1.21
VPS50-212ENST00000476413 NT5C1B-RDH14C9J2C7 533 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 GOLIM4O00461 696 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 FARP2O94887 1054 aaPredicted RBP7.5□□□□□ -1.21
VPS50-212ENST00000476413 TYRP14679 529 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 MALP21145 153 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 PEX2P28328 305 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 ALDH5A1P51649 535 aaPredicted RBP7.5□□□□□ -1.21
VPS50-212ENST00000476413 PER3P56645 1201 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 GJA9P57773 515 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 BPIFB4P59827 614 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 NFYCQ13952 458 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 PLS1Q14651 629 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 RAB39AQ14964 217 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 ZMAT1Q5H9K5 638 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 C11orf96Q7Z7L8 435 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 DCBLD1Q8N8Z6 715 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 ANKRD53Q8N9V6 530 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 OR14K1Q8NGZ2 314 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 UHRF1Q96T88 793 aaPredicted RBP7.5□□□□□ -1.21
VPS50-212ENST00000476413 PSMD1Q99460 953 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 APOL5Q9BWW9 433 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 ARMT1Q9H993 441 aa7.5□□□□□ -1.21
VPS50-212ENST00000476413 ZMAT3Q9HA38 289 aaKnown RBP7.5□□□□□ -1.21
VPS50-212ENST00000476413 AJAP1Q9UKB5 411 aaPredicted RBP7.5□□□□□ -1.21
VPS50-212ENST00000476413 LOC102724159A0A0B4J2E5 919 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 MATN2O00339 956 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 GPR32O75388 356 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 TSPAN15O95858 294 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 LDHAP00338 332 aaKnown RBP7.49□□□□□ -1.21
VPS50-212ENST00000476413 JUNP05412 331 aaKnown RBP7.49□□□□□ -1.21
VPS50-212ENST00000476413 MYL3P08590 195 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 GYPEP15421 78 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 DDCP20711 480 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 TM4SF4P48230 202 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 AFF3P51826 1226 aaKnown RBP7.49□□□□□ -1.21
VPS50-212ENST00000476413 CACNB3P54284 484 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 GPSM2P81274 684 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 DUSP2Q05923 314 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 SAFB2Q14151 953 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS50-212ENST00000476413 PWP2Q15269 919 aaKnown RBP7.49□□□□□ -1.21
VPS50-212ENST00000476413 RNF151Q2KHN1 245 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 ZNF572Q7Z3I7 529 aaPredicted RBP7.49□□□□□ -1.21
VPS50-212ENST00000476413 SPICE1Q8N0Z3 855 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 KRT78Q8N1N4 520 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 LINC01356Q8N9X3 169 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 MORC4Q8TE76 937 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 LRTOMTQ8WZ04 291 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 SLC35A4Q96G79 324 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 PPP1R16BQ96T49 567 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 ELAC2Q9BQ52 826 aaKnown RBP7.49□□□□□ -1.21
VPS50-212ENST00000476413 JADE2Q9NQC1 790 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 LMBRD1Q9NUN5 540 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 STAP2Q9UGK3 403 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 TAGLN3Q9UI15 199 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 ZDHHC9Q9Y397 364 aa7.49□□□□□ -1.21
VPS50-212ENST00000476413 RFXAPO00287 272 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 ARHGAP6O43182 974 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 PQBP1O60828 265 aaKnown RBP7.48□□□□□ -1.21
VPS50-212ENST00000476413 ALOX15P16050 662 aaPredicted RBP7.48□□□□□ -1.21
VPS50-212ENST00000476413 CASRP41180 1078 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 MORC3Q14149 939 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 VPS72Q15906 364 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 ZNF385BQ569K4 471 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 RALYLQ86SE5 291 aaKnown RBP7.48□□□□□ -1.21
VPS50-212ENST00000476413 ADGRE4PQ86SQ3 457 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 RSPH3Q86UC2 560 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 MORC1Q86VD1 984 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 EXOC8Q8IYI6 725 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 BHLHE22Q8NFJ8 381 aaPredicted RBP7.48□□□□□ -1.21
VPS50-212ENST00000476413 MDM1Q8TC05 714 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 CASKIN2Q8WXE0 1202 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 STON2Q8WXE9 905 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 ANKS1AQ92625 1134 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 GJA10Q969M2 543 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 CEP95Q96GE4 821 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 LCORQ96JN0 433 aaPredicted RBP7.48□□□□□ -1.21
VPS50-212ENST00000476413 SENP6Q9GZR1 1112 aaPredicted RBP7.48□□□□□ -1.21
VPS50-212ENST00000476413 KCNH6Q9H252 994 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 RSAD1Q9HA92 442 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 ABCF2Q9UG63 623 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 ACTL7AQ9Y615 435 aa7.48□□□□□ -1.21
VPS50-212ENST00000476413 CFAP69A5D8W1 941 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 FRS3O43559 492 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 CTXN1P60606 82 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 FGL2Q14314 439 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 KCNA10Q16322 511 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 VMACQ2NL98 169 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 CCDC157Q569K6 752 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 MFSD14BQ5SR56 506 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 ZNF648Q5T619 568 aaPredicted RBP7.47□□□□□ -1.21
VPS50-212ENST00000476413 CERS3Q8IU89 383 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms