RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 SENP6Q9GZR1 1112 aaPredicted RBP5.41□□□□□ -1.54
LRCH3-214ENST00000473177 IL25Q9H293 177 aa5.41□□□□□ -1.54
LRCH3-214ENST00000473177 FOXP1Q9H334 677 aaPredicted RBP5.41□□□□□ -1.54
LRCH3-214ENST00000473177 BICC1Q9H694 974 aaKnown RBP5.41□□□□□ -1.54
LRCH3-214ENST00000473177 HAUS4Q9H6D7 363 aa5.41□□□□□ -1.54
LRCH3-214ENST00000473177 LUC7LQ9NQ29 371 aaKnown RBP5.41□□□□□ -1.54
LRCH3-214ENST00000473177 RNF14Q9UBS8 474 aa5.41□□□□□ -1.54
LRCH3-214ENST00000473177 HPSEQ9Y251 543 aa5.41□□□□□ -1.54
LRCH3-214ENST00000473177 ATP11BQ9Y2G3 1177 aa5.41□□□□□ -1.54
LRCH3-214ENST00000473177 ATXN2Q99700 1313 aaKnown RBP5.41□□□□□ -1.54
LRCH3-214ENST00000473177 STK36Q9NRP7 1315 aa5.41□□□□□ -1.54
LRCH3-214ENST00000473177 SALL1Q9NSC2 1324 aa5.41□□□□□ -1.54
LRCH3-214ENST00000473177 DDX60LQ5H9U9 1706 aaKnown RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 KLF18A0A0U1RQI7 1052 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 GOLGA6L7A0A1B0GV03 622 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 ERICH2A1L162 156 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 VWA3AA6NCI4 1184 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 GOLGA8BA8MQT2 603 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 CXCL11O14625 94 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 PRC1O43663 620 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 KRT86O43790 486 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 USO1O60763 962 aaKnown RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 EOMESO95936 686 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 F13BP05160 661 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 IFIT1P09914 478 aaKnown RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 FAM87AP0C7U9 286 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 ACRP10323 421 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 HSPD1P10809 573 aaKnown RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 COL6A1P12109 1028 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 IL1R1P14778 569 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 CYLC1P35663 651 aaPredicted RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 METAP2P50579 478 aaKnown RBP eCLIP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 RTP1P59025 263 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 CCT2P78371 535 aaKnown RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 ITIH3Q06033 890 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 RBL2Q08999 1139 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 DRP2Q13474 957 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 NR1I3Q14994 352 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 NCAPHQ15003 741 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 POSTNQ15063 836 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 CPSF6Q16630 551 aaKnown RBP eCLIP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 RABL6Q3YEC7 729 aaPredicted RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 GLE1Q53GS7 698 aaKnown RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 BEND6Q5SZJ8 279 aaPredicted RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 ZNF746Q6NUN9 644 aaPredicted RBP5.4□□□□□ -1.54
LRCH3-214ENST00000473177 RUFY4Q6ZNE9 571 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 FAM83AQ86UY5 434 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 FAM114A1Q8IWE2 563 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 CCDC170Q8IYT3 715 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 ARFGAP2Q8N6H7 521 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 TOP6BLQ8N6T0 577 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 C3orf20Q8ND61 904 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 FAM76AQ8TAV0 307 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 P3H4Q92791 437 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 BADQ92934 168 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 TEKT1Q969V4 418 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 MFSD14AQ96MC6 490 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 SLC9A7Q96T83 725 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 SIL1Q9H173 461 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 GOLPH3LQ9H4A5 285 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 FANCLQ9NW38 375 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 GGA2Q9UJY4 613 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 MYO6Q9UM54 1294 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 L1RE1Q9UN81 338 aa5.4□□□□□ -1.54
LRCH3-214ENST00000473177 ZMYM6O95789 1325 aa5.4□□□□□ -1.55
LRCH3-214ENST00000473177 A0A0G2JLL6 359 aaPredicted RBP5.39□□□□□ -1.55
LRCH3-214ENST00000473177 SCO2A0A1W2PP80 73 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 ANO9A1A5B4 782 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 EIF3CLB5ME19 914 aaKnown RBP5.39□□□□□ -1.55
LRCH3-214ENST00000473177 SNAP23O00161 211 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 ZBTB43O43298 467 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 LEFTY1O75610 366 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 STK10O94804 968 aaKnown RBP5.39□□□□□ -1.55
LRCH3-214ENST00000473177 ERLIN2O94905 339 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 UBOX5O94941 541 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 FGFR1OPO95684 399 aaKnown RBP5.39□□□□□ -1.55
LRCH3-214ENST00000473177 CALM1P0DP23 149 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 CALM2P0DP24 149 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 CALM3P0DP25 149 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 PRLRP16471 622 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 GNAT2P19087 354 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 CYP2B6P20813 491 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 POLR2BP30876 1174 aaKnown RBP5.39□□□□□ -1.55
LRCH3-214ENST00000473177 ETV3P41162 512 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 LIFRP42702 1097 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 NOP2P46087 812 aaKnown RBP5.39□□□□□ -1.55
LRCH3-214ENST00000473177 MOGSQ13724 837 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 CASP8Q14790 479 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 FAM110CQ1W6H9 321 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 AAK1Q2M2I8 961 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 CYP27C1Q4G0S4 372 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 ZNF569Q5MCW4 686 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 NOL9Q5SY16 702 aaKnown RBP5.39□□□□□ -1.55
LRCH3-214ENST00000473177 AKNAD1Q5T1N1 836 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 MCTP2Q6DN12 878 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 NFXL1Q6ZNB6 911 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 CCDC129Q6ZRS4 1044 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 FAM214BQ7L5A3 538 aa5.39□□□□□ -1.55
LRCH3-214ENST00000473177 PRRT2Q7Z6L0 340 aaPredicted RBP5.39□□□□□ -1.55
LRCH3-214ENST00000473177 SHISA5Q8N114 240 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms