RNA–Protein interactions for RNA: ENST00000472255.1

TUBBP11-201, Transcript of tubulin beta class I pseudogene 11, humanhuman

BASIC

Gene TUBBP11, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP11-201ENST00000472255 HOXC13P31276 330 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 BRCC3P46736 316 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 CDC42EP1Q00587 391 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 SPAG1Q07617 926 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 RAD51AP2Q09MP3 1159 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 TFDP1Q14186 410 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 HSP90AA2PQ14568 343 aaPredicted RBP8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 ZRSR1Q15695 479 aaKnown RBP8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 SEZ6Q53EL9 994 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 NT5DC1Q5TFE4 455 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 PPFIBP1Q86W92 1011 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 CEP120Q8N960 986 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 FGF14Q92915 247 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 GTF3C6Q969F1 213 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 SNX27Q96L92 541 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 PLA2G2FQ9BZM2 168 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 RXFP1Q9HBX9 757 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 WDR6Q9NNW5 1121 aaKnown RBP8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 KANSL3Q9P2N6 904 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 ADAM28Q9UKQ2 775 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 DUSP12Q9UNI6 340 aa8.05□□□□□ -1.12
TUBBP11-201ENST00000472255 STK36Q9NRP7 1315 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 CNTNAP2Q9UHC6 1331 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 FSD2A1L4K1 749 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 TULP1O00294 542 aaPredicted RBP8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 ASAP2O43150 1006 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 PRKCBP05771 671 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 LAMP2P13473 410 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 GJA1P17302 382 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 XBP1P17861 261 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 AOC1P19801 751 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 FSHRP23945 695 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 CLCN5P51795 746 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 PRPF4BQ13523 1007 aaKnown RBP8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 GIT2Q14161 759 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 USP41Q3LFD5 358 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 SLC27A1Q6PCB7 646 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 LILRA6Q6PI73 481 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 TSSK4Q6SA08 328 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 PADI6Q6TGC4 694 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 CD300LGQ6UXG3 332 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 CCDC105Q8IYK2 499 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 SLFN12Q8IYM2 578 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 KIAA2013Q8IYS2 634 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 RNF168Q8IYW5 571 aaPredicted RBP8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 PLCD3Q8N3E9 789 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 C3orf58Q8NDZ4 430 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 LNX1Q8TBB1 728 aaPredicted RBP8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 SLC7A14Q8TBB6 771 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 C18orf25Q96B23 403 aaPredicted RBP8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 MCRS1Q96EZ8 462 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 ZBTB45Q96K62 511 aaPredicted RBP8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 PRKD2Q9BZL6 878 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 CHST7Q9NS84 486 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 ANKEF1Q9NU02 776 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 USTQ9Y2C2 406 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 GIT1Q9Y2X7 761 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 C2orf16Q68DN1 1984 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 MYO15AQ9UKN7 3530 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 CACNA1HO95180 2353 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 VPS13AQ96RL7 3174 aa8.04□□□□□ -1.12
TUBBP11-201ENST00000472255 NPHP3-ACAD11A0A0J9YXS1 232 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 A0A1B0GUA9 196 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 ARHGEF35A5YM69 484 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 E9PMD0 336 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 MEFVO15553 781 aaPredicted RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 DKC1O60832 514 aaKnown RBP eCLIP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 ZMYND10O75800 440 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 DGAT1O75907 488 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 C8AP07357 584 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 TKTP29401 623 aaKnown RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 OR1D2P34982 312 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 CCT6AP40227 531 aaKnown RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 NBL1P41271 181 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 CLCNKBP51801 687 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 CACNB1Q02641 598 aaPredicted RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 SOX4Q06945 474 aaPredicted RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 NCBP1Q09161 790 aaKnown RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 HTR4Q13639 388 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 MXD4Q14582 209 aaPredicted RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 PSMD5Q16401 504 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 IL17AQ16552 155 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 PPM1LQ5SGD2 360 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 DCLRE1AQ6PJP8 1040 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 HS6ST3Q8IZP7 471 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 DEPTORQ8TB45 409 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 NKD2Q969F2 451 aaPredicted RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 TCEAL4Q96EI5 215 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 HINFPQ9BQA5 517 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 TTPALQ9BTX7 342 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 PPP4R2Q9NY27 417 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 DNMT3BQ9UBC3 853 aaKnown RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 PTPRZ1P23471 2315 aaPredicted RBP8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 DMDP11532 3685 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 DOCK6Q96HP0 2047 aa8.03□□□□□ -1.12
TUBBP11-201ENST00000472255 CCDC169A6NNP5 214 aa8.02□□□□□ -1.13
TUBBP11-201ENST00000472255 NR1I2O75469 434 aa8.02□□□□□ -1.13
TUBBP11-201ENST00000472255 LYPLA2O95372 231 aa8.02□□□□□ -1.13
TUBBP11-201ENST00000472255 CEBPBP17676 345 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms