RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 NAMPTP43490 491 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 TOB1P50616 345 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-210ENST00000469897 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
CPSF4-210ENST00000469897 HMGN5P82970 282 aaKnown RBP14.66□□□□□ -0.06
CPSF4-210ENST00000469897 TUSC3Q13454 348 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 PDIA5Q14554 519 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 EEF1DP3Q658K8 133 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 PRSS55Q6UWB4 352 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-210ENST00000469897 CEP57Q86XR8 500 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 TMEM105Q8N8V8 129 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 HDAC7Q8WUI4 952 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 RSAD2Q8WXG1 361 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 KIFC3Q9BVG8 833 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 CCDC113Q9H0I3 377 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 NT5C3AQ9H0P0 336 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 BHMT2Q9H2M3 363 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 PIDD1Q9HB75 910 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 WDR6Q9NNW5 1121 aaKnown RBP14.66□□□□□ -0.06
CPSF4-210ENST00000469897 NOL7Q9UMY1 257 aaKnown RBP14.66□□□□□ -0.06
CPSF4-210ENST00000469897 GDAQ9Y2T3 454 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 TECTAO75443 2155 aa14.66□□□□□ -0.06
CPSF4-210ENST00000469897 PTGDRQ13258 359 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 TDGQ13569 410 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 RTP2Q5QGT7 225 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 ELMSAN1Q6PJG2 1045 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 CYP26C1Q6V0L0 522 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 SMG7Q92540 1137 aaKnown RBP14.65□□□□□ -0.06
CPSF4-210ENST00000469897 ATOH1Q92858 354 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-210ENST00000469897 ZNF707Q96C28 371 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-210ENST00000469897 IFT74Q96LB3 600 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 ADPGKQ9BRR6 497 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 MFSD1Q9H3U5 465 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 PLEKHA4Q9H4M7 779 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 SH2B1Q9NRF2 756 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-210ENST00000469897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.65□□□□□ -0.06
CPSF4-210ENST00000469897 DDX19AQ9NUU7 478 aaKnown RBP14.65□□□□□ -0.06
CPSF4-210ENST00000469897 FNIP2Q9P278 1114 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 PCDHB6Q9Y5E3 794 aa14.65□□□□□ -0.06
CPSF4-210ENST00000469897 E9PMD0 336 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 K7ERI5 159 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 RECQL4O94761 1208 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 KIF4AO95239 1232 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 MUTP22033 750 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 IGFBP6P24592 240 aaPredicted RBP14.64□□□□□ -0.07
CPSF4-210ENST00000469897 U2AF2P26368 475 aaKnown RBP eCLIP14.64□□□□□ -0.07
CPSF4-210ENST00000469897 CDC25AP30304 524 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 TRAPPC10P48553 1259 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 PPP2R5AQ15172 486 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 NAB2Q15742 525 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 NT5DC1Q5TFE4 455 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 FAM171A1Q5VUB5 890 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 HAUS3Q68CZ6 603 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 ASTLQ6HA08 431 aaPredicted RBP14.64□□□□□ -0.07
CPSF4-210ENST00000469897 GPR65Q8IYL9 337 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 FLCNQ8NFG4 579 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 LNX1Q8TBB1 728 aaPredicted RBP14.64□□□□□ -0.07
CPSF4-210ENST00000469897 CLSTN3Q9BQT9 956 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 TTPALQ9BTX7 342 aa14.64□□□□□ -0.07
CPSF4-210ENST00000469897 PP2D1A8MPX8 630 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 GALR2O43603 387 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-210ENST00000469897 PI15O43692 258 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 NARSO43776 548 aaKnown RBP14.63□□□□□ -0.07
CPSF4-210ENST00000469897 C1RP00736 705 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 NPR3P17342 541 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 EFNA5P52803 228 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 NUBP1P53384 320 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 IL17AQ16552 155 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 ATF7IP2Q5U623 682 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 SLC44A3Q8N4M1 653 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 IGSF22Q8N9C0 903 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 ST13P5Q8NFI4 369 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-210ENST00000469897 SNX29Q8TEQ0 813 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 STAMQ92783 540 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 KIFAP3Q92845 792 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 MYADMQ96S97 322 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 RHOBTB2Q9BYZ6 727 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 PRKD2Q9BZL6 878 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 IGSF9Q9P2J2 1179 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 DNM3Q9UQ16 869 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 TRIOO75962 3097 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 CLUHO75153 1309 aa14.63□□□□□ -0.07
CPSF4-210ENST00000469897 SF3B1O75533 1304 aaKnown RBP eCLIP14.63□□□□□ -0.072e-6■■■■■ 112
CPSF4-210ENST00000469897 CCDC169A6NNP5 214 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 ZMYND10O75800 440 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 CLCN5P51795 746 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 PEX3P56589 373 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 CREMQ03060 361 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 GLRA4Q5JXX5 417 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 IRF2BPLQ9H1B7 796 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 ZDHHC7Q9NXF8 308 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 EPS15L1Q9UBC2 864 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 FBXL21Q9UKT6 434 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 STK24Q9Y6E0 443 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 MUC6Q6W4X9 2439 aa14.62□□□□□ -0.07
CPSF4-210ENST00000469897 ZMYM2Q9UBW7 1377 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 WDR81Q562E7 1941 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 SFI1A8K8P3 1242 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 ADAM12O43184 909 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 B3GAT3O94766 335 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 CFHP08603 1231 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms