RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 URB1O60287 2271 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 F5P12259 2224 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 SLC22A31A6NKX4 558 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 SHISA8B8ZZ34 492 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 APAF1O14727 1248 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 PDPK1O15530 556 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 LAMTOR5O43504 91 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 DLGAP3O95886 979 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 DCNP07585 359 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 UQCRFS1P1P0C7P4 283 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 NTF4P34130 210 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 DGKGP49619 791 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 DYNLL1P63167 89 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 HNRNPUQ00839 825 aaKnown RBP eCLIP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 GABPAQ06546 454 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 TRIM71Q2Q1W2 868 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 FOXD4L6Q3SYB3 417 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 HP1BP3Q5SSJ5 553 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 FBXW10Q5XX13 1052 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 SYCE2Q6PIF2 218 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 FOXD4L3Q6VB84 417 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 SIAH1Q8IUQ4 282 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 LILRB2Q8N423 598 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 GALNT6Q8NCL4 622 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 ST13P5Q8NFI4 369 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 APBB2Q92870 758 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 NEUROD6Q96NK8 337 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 HNRNPABQ99729 332 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 CNNM2Q9H8M5 875 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 CYP26B1Q9NR63 512 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 REV1Q9UBZ9 1251 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 GTF2IRD1Q9UHL9 959 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 FBXO4Q9UKT5 387 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 SIT1Q9Y3P8 196 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 CORINQ9Y5Q5 1042 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 DDX49Q9Y6V7 483 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 CREBBPQ92793 2442 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 LOC400499M0QZD8 3231 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 C2CD3Q4AC94 2353 aa4.77□□□□□ -1.65
ECHDC1-211ENST00000460558 DOPEY2Q9Y3R5 2298 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 SMG1Q96Q15 3661 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 MYH6P13533 1939 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 LOC102724159A0A0B4J2E5 919 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 KRBA1A5PL33 1030 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 GJB6O95452 261 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 EEF2P13639 858 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 NME1P15531 152 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 CYP7A1P22680 504 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 CDC25BP30305 580 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 THPOP40225 353 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 UBE3AQ05086 875 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 PDE4BQ07343 736 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 KCNC3Q14003 757 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 PWP2Q15269 919 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 LAIR1Q6GTX8 287 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 OVOS1Q6IE37 1185 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 XRRA1Q6P2D8 792 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 PRR23CQ6ZRP0 262 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 DHX37Q8IY37 1157 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 LRRC47Q8N1G4 583 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 ZBTB44Q8NCP5 570 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 MORC4Q8TE76 937 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 SCFD2Q8WU76 684 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 CASP10Q92851 521 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 IRF7Q92985 503 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 ACSF2Q96CM8 615 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 CCDC17Q96LX7 622 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 NUP88Q99567 741 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 DNAJC7Q99615 494 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 KATNAL1Q9BW62 490 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 BRINP2Q9C0B6 783 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 ADAM7Q9H2U9 754 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 KANSL2Q9H9L4 492 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 RC3H2Q9HBD1 1191 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 SLC38A10Q9HBR0 1119 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 RNF146Q9NTX7 359 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 SPATA6Q9NWH7 488 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 ZSCAN32Q9NX65 697 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 TMEM260Q9NX78 707 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 DLGAP2Q9P1A6 1054 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 HDAC6Q9UBN7 1215 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 ADD3Q9UEY8 706 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 SWAP70Q9UH65 585 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 CDH22Q9UJ99 828 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 DBR1Q9UK59 544 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 SLC12A7Q9Y666 1083 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 ASCC3Q8N3C0 2202 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 TEX15Q9BXT5 2789 aa4.76□□□□□ -1.65
ECHDC1-211ENST00000460558 CACNA1EQ15878 2313 aa4.75□□□□□ -1.65
ECHDC1-211ENST00000460558 MEGF11A6BM72 1044 aa4.75□□□□□ -1.65
ECHDC1-211ENST00000460558 VAMP4O75379 141 aa4.75□□□□□ -1.65
ECHDC1-211ENST00000460558 EOMESO95936 686 aa4.75□□□□□ -1.65
ECHDC1-211ENST00000460558 RETP07949 1114 aa4.75□□□□□ -1.65
ECHDC1-211ENST00000460558 AKR1B1P15121 316 aa4.75□□□□□ -1.65
ECHDC1-211ENST00000460558 LIG1P18858 919 aa4.75□□□□□ -1.65
ECHDC1-211ENST00000460558 CASTP20810 708 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-211ENST00000460558 CD68P34810 354 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-211ENST00000460558 CSTF1Q05048 431 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms