RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 ALG13Q9NP73 1137 aaKnown RBP11.06□□□□□ -0.64
RFX3-210ENST00000457373 TBC1D13Q9NVG8 400 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 GDAQ9Y2T3 454 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 GIT1Q9Y2X7 761 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 PCDHB12Q9Y5F1 795 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 PLXNA4Q9HCM2 1894 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 TRIP11Q15643 1979 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 NT5C1B-RDH14C9J2C7 533 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 C5orf67F2Z3F1 127 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 GRM6O15303 877 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 PBX3P40426 434 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 MLH1P40692 756 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 SYKP43405 635 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 SCNN1GP51170 649 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 NDUFA8P51970 172 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 OSTNP61366 133 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 ASIC1P78348 528 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 DCAF4L1Q3SXM0 396 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 KCNT2Q6UVM3 1135 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 ZNF720Q7Z2F6 126 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 APBB1IPQ7Z5R6 666 aaPredicted RBP11.05□□□□□ -0.64
RFX3-210ENST00000457373 ZNF280BQ86YH2 543 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 CCDC65Q8IXS2 484 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 GRAMD1CQ8IYS0 662 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 CEP120Q8N960 986 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 TTC13Q8NBP0 860 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 MRPS27Q92552 414 aaKnown RBP11.05□□□□□ -0.64
RFX3-210ENST00000457373 P2RX5Q93086 422 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 ZFP42Q96MM3 310 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 ZNF558Q96NG5 402 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 C7orf25Q9BPX7 421 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 C11orf84Q9BUA3 381 aaPredicted RBP11.05□□□□□ -0.64
RFX3-210ENST00000457373 PLVAPQ9BX97 442 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 TRIM9Q9C026 710 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 CDT1Q9H211 546 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 MRPL44Q9H9J2 332 aaKnown RBP11.05□□□□□ -0.64
RFX3-210ENST00000457373 KANSL3Q9P2N6 904 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 ANKFY1Q9P2R3 1169 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 TBX20Q9UMR3 447 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 HPSEQ9Y251 543 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 MTCH2Q9Y6C9 303 aa11.05□□□□□ -0.64
RFX3-210ENST00000457373 A0A1W2PQ27 194 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 A0A1W2PQ64 194 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 A0A1W2PQD8 194 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 ARL5CA6NH57 179 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 ACTN4O43707 911 aaKnown RBP11.04□□□□□ -0.64
RFX3-210ENST00000457373 ZC3H11AO75152 810 aaKnown RBP eCLIP11.04□□□□□ -0.64
RFX3-210ENST00000457373 DDHD2O94830 711 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 GCNT3O95395 438 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 ITGB1P05556 798 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 SLFN14P0C7P3 912 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 LIG4P49917 911 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 BCAR1P56945 870 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 GTF2BQ00403 316 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 COASYQ13057 564 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 CUL4BQ13620 913 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 SEZ6Q53EL9 994 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 MPZL3Q6UWV2 235 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 ZPBP2Q6X784 338 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 SLC17A8Q8NDX2 589 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 MAFAQ8NHW3 353 aaPredicted RBP11.04□□□□□ -0.64
RFX3-210ENST00000457373 SPPL3Q8TCT6 385 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 POF1BQ8WVV4 589 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 HPS3Q969F9 1004 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 RPS6KC1Q96S38 1066 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
RFX3-210ENST00000457373 GOLPH3LQ9H4A5 285 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 MAGEF1Q9HAY2 307 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 PTPRHQ9HD43 1115 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 SEL1LQ9UBV2 794 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 DNAJB4Q9UDY4 337 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 PLAGL2Q9UPG8 496 aa11.04□□□□□ -0.64
RFX3-210ENST00000457373 FAM237AA0A1B0GTK4 181 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 FRMD3A2A2Y4 597 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 ANKRD63C9JTQ0 380 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 ABLIM1O14639 778 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 CLDN3O15551 220 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 TOM1L1O75674 476 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 FGF18O76093 207 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 RECQL4O94761 1208 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 PRPF6O94906 941 aaKnown RBP11.03□□□□□ -0.64
RFX3-210ENST00000457373 ALDH2P05091 517 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 GALTP07902 379 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 MYBP10242 640 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 MCF2P10911 925 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 POU3F3P20264 500 aaPredicted RBP11.03□□□□□ -0.64
RFX3-210ENST00000457373 PROZP22891 400 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 ABCD1P33897 745 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 GRM5P41594 1212 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 OR1G1P47890 313 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 ALDH7A1P49419 539 aaKnown RBP11.03□□□□□ -0.64
RFX3-210ENST00000457373 PTPROQ16827 1216 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 UNC13DQ70J99 1090 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 RSPH1Q8WYR4 309 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 MRPL38Q96DV4 380 aaKnown RBP11.03□□□□□ -0.64
RFX3-210ENST00000457373 PAGE5Q96GU1 130 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 ACAP3Q96P50 834 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 FGFBP2Q9BYJ0 223 aa11.03□□□□□ -0.64
RFX3-210ENST00000457373 CXCL16Q9H2A7 254 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms