RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 DDX23Q9BUQ8 820 aaKnown RBP8.45□□□□□ -1.06
BRCC3-208ENST00000453705 LRRC2Q9BYS8 371 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 VPS11Q9H270 941 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 FOXP1Q9H334 677 aaPredicted RBP8.45□□□□□ -1.06
BRCC3-208ENST00000453705 TRPV4Q9HBA0 871 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 GRHPRQ9UBQ7 328 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 MYH4Q9Y623 1939 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 GOLGA8AA7E2F4 631 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 IFIT3O14879 490 aaKnown RBP8.44□□□□□ -1.06
BRCC3-208ENST00000453705 RIPK2O43353 540 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 NCK2O43639 380 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 THEGLP0DJG4 465 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 HSD3B1P14060 373 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 HNF4AP41235 474 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 RPIAP49247 311 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 PPFIA1Q13136 1202 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 LBRQ14739 615 aaKnown RBP8.44□□□□□ -1.06
BRCC3-208ENST00000453705 SURF1Q15526 300 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 COX20Q5RI15 118 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 TXNRD3Q86VQ6 643 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 GJD3Q8N144 294 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 PPP1R35Q8TAP8 253 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 FATE1Q969F0 183 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 TIGD1Q96MW7 591 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 ZSCAN10Q96SZ4 725 aaPredicted RBP8.44□□□□□ -1.06
BRCC3-208ENST00000453705 EHMT1Q9H9B1 1298 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 JRKLQ9Y4A0 524 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 SLC12A7Q9Y666 1083 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 ITIH6Q6UXX5 1313 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 ERICH2A1L162 156 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 CCDC69A6NI79 296 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 FZD9O00144 591 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 RANBP6O60518 1105 aaKnown RBP8.44□□□□□ -1.06
BRCC3-208ENST00000453705 IDUAP35475 653 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 ITIH3Q06033 890 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 ZBTB17Q13105 803 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 ADALQ6DHV7 355 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 ABRAXAS1Q6UWZ7 409 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 GBP6Q6ZN66 633 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 CRACR2BQ8N4Y2 399 aaPredicted RBP8.44□□□□□ -1.06
BRCC3-208ENST00000453705 PGBD1Q96JS3 809 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 TTLL2Q9BWV7 592 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 GJD2Q9UKL4 321 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 FAM184BQ9ULE4 1060 aa8.44□□□□□ -1.06
BRCC3-208ENST00000453705 NOSIPQ9Y314 301 aaKnown RBP8.44□□□□□ -1.06
BRCC3-208ENST00000453705 A6NLC8 198 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 AP3B1O00203 1094 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 CACNB4O00305 520 aaPredicted RBP8.43□□□□□ -1.06
BRCC3-208ENST00000453705 SIN3BO75182 1162 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 PRKD3O94806 890 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 PRIM2P49643 509 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 NR1H2P55055 460 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 BEX3Q00994 111 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 TROAPQ12815 778 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 RTN1Q16799 776 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 SFMBT2Q5VUG0 894 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 SLC30A6Q6NXT4 461 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 PDZD4Q76G19 769 aaPredicted RBP8.43□□□□□ -1.06
BRCC3-208ENST00000453705 TAOK1Q7L7X3 1001 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 TRIM50Q86XT4 487 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 SPATA2LQ8IUW3 424 aaPredicted RBP8.43□□□□□ -1.06
BRCC3-208ENST00000453705 LINC00301Q8NCQ3 95 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 PIGSQ96S52 555 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 ZNF287Q9HBT7 754 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 KRT82Q9NSB4 513 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 SPATA7Q9P0W8 599 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 CCDC39Q9UFE4 941 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 ZNF711Q9Y462 761 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 B4DLN1 442 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 NMT2O60551 498 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 VEGFAP15692 232 aaPredicted RBP8.43□□□□□ -1.06
BRCC3-208ENST00000453705 FERP16591 822 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 KRT9P35527 623 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 DYNLL1P63167 89 aaKnown RBP8.43□□□□□ -1.06
BRCC3-208ENST00000453705 SCARB2Q14108 478 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 CCDC38Q502W7 563 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 SPDYCQ5MJ68 293 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 HHIPL2Q6UWX4 724 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 FANCBQ8NB91 859 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 ANKK1Q8NFD2 765 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 MAML1Q92585 1016 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 TTC17Q96AE7 1141 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 EYA3Q99504 573 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 VCPKMTQ9H867 229 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 PLSCR4Q9NRQ2 329 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 OGFRQ9NZT2 677 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 SEPT10Q9P0V9 454 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 EPS15L1Q9UBC2 864 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 STRIP2Q9ULQ0 834 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 BARX2Q9UMQ3 279 aaPredicted RBP8.43□□□□□ -1.06
BRCC3-208ENST00000453705 COG5Q9UP83 839 aa8.43□□□□□ -1.06
BRCC3-208ENST00000453705 H0Y626 953 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 THAP12O43422 761 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 AOC2O75106 756 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 ZNF254O75437 659 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 UFL1O94874 794 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 TOP1P11387 765 aaKnown RBP8.42□□□□□ -1.06
BRCC3-208ENST00000453705 PRDX5P30044 214 aa8.42□□□□□ -1.06
BRCC3-208ENST00000453705 ELF1P32519 619 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms