RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 FAM186BQ8IYM0 893 aa15.94■□□□□ 0.14
SHANK2-210ENST00000449116 HACE1Q8IYU2 909 aa15.94■□□□□ 0.14
SHANK2-210ENST00000449116 CEP120Q8N960 986 aa15.94■□□□□ 0.14
SHANK2-210ENST00000449116 SMG8Q8ND04 991 aaKnown RBP15.94■□□□□ 0.14
SHANK2-210ENST00000449116 CCDC94Q9BW85 323 aaPredicted RBP15.94■□□□□ 0.14
SHANK2-210ENST00000449116 CPSF3Q9UKF6 684 aaKnown RBP15.94■□□□□ 0.14
SHANK2-210ENST00000449116 NR2E3Q9Y5X4 410 aa15.94■□□□□ 0.14
SHANK2-210ENST00000449116 C9IYK1 514 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 ENPP3O14638 875 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 ZNF623O75123 536 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 ADRB2P07550 413 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 CLTAP09496 248 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 TNFSF9P41273 254 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 POU5F1Q01860 360 aaKnown RBP15.93■□□□□ 0.14
SHANK2-210ENST00000449116 IKBKEQ14164 716 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 CCDC40Q4G0X9 1142 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 CDKAL1Q5VV42 579 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 FRMD5Q7Z6J6 570 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 IRF2BP1Q8IU81 584 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 RDH13Q8NBN7 331 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 TET1Q8NFU7 2136 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 CNOT6LQ96LI5 555 aaKnown RBP15.93■□□□□ 0.14
SHANK2-210ENST00000449116 ACAP3Q96P50 834 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 RBSNQ9H1K0 784 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 HSD3B7Q9H2F3 369 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 NXF3Q9H4D5 531 aaKnown RBP15.93■□□□□ 0.14
SHANK2-210ENST00000449116 METTL14Q9HCE5 456 aaKnown RBP15.93■□□□□ 0.14
SHANK2-210ENST00000449116 SNTG2Q9NY99 539 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 PCDH10Q9P2E7 1040 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 MAGEC2Q9UBF1 373 aaPredicted RBP15.93■□□□□ 0.14
SHANK2-210ENST00000449116 HES2Q9Y543 173 aa15.93■□□□□ 0.14
SHANK2-210ENST00000449116 LTBP2Q14767 1821 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 ABHD14A-ACY1A0A1B0GW23 586 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 ACRP10323 421 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 ACTN1P12814 892 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 ZNF18P17022 549 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 EEF1GP26641 437 aaKnown RBP15.92■□□□□ 0.14
SHANK2-210ENST00000449116 YARSP54577 528 aaKnown RBP15.92■□□□□ 0.14
SHANK2-210ENST00000449116 MARSP56192 900 aaKnown RBP15.92■□□□□ 0.14
SHANK2-210ENST00000449116 FAM189BP81408 668 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 SPAG1Q07617 926 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 HSP90AA4PQ58FG1 418 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 INTS8Q75QN2 995 aaKnown RBP15.92■□□□□ 0.14
SHANK2-210ENST00000449116 MRPL10Q7Z7H8 261 aaKnown RBP15.92■□□□□ 0.14
SHANK2-210ENST00000449116 ECHDC2Q86YB7 292 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 BRSK2Q8IWQ3 736 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 TMEM192Q8IY95 271 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 PGBD4Q96DM1 585 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 MFSD14AQ96MC6 490 aa15.92■□□□□ 0.14
SHANK2-210ENST00000449116 LBHD1Q9BQE6 289 aaPredicted RBP15.92■□□□□ 0.14
SHANK2-210ENST00000449116 RPF1Q9H9Y2 349 aaKnown RBP15.92■□□□□ 0.14
SHANK2-210ENST00000449116 RBAKQ9NYW8 714 aaPredicted RBP15.92■□□□□ 0.14
SHANK2-210ENST00000449116 ARMCX3Q9UH62 379 aaPredicted RBP15.92■□□□□ 0.14
SHANK2-210ENST00000449116 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.91■□□□□ 0.14
SHANK2-210ENST00000449116 KCNJ18B7U540 433 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 EFCAB14O75071 495 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 RECQL4O94761 1208 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 BAIAP3O94812 1187 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 ITGA4P13612 1032 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 KRT13P13646 458 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 CDK11BP21127 795 aaKnown RBP15.91■□□□□ 0.14
SHANK2-210ENST00000449116 CYP24A1Q07973 514 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 KCNJ12Q14500 433 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 ENOX2Q16206 610 aaKnown RBP15.91■□□□□ 0.14
SHANK2-210ENST00000449116 TCP11X2Q5H9J9 407 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 PSRC1Q6PGN9 363 aaPredicted RBP15.91■□□□□ 0.14
SHANK2-210ENST00000449116 CREBRFQ8IUR6 639 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 ANKRD20A12PQ8NF67 263 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 BORCS6Q96GS4 357 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 APOL6Q9BWW8 343 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 ELAC1Q9H777 363 aaKnown RBP15.91■□□□□ 0.14
SHANK2-210ENST00000449116 PARP2Q9UGN5 583 aa15.91■□□□□ 0.14
SHANK2-210ENST00000449116 IL18RAPO95256 599 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 EOMESO95936 686 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 CXCL8P10145 99 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 ATF7P17544 494 aaPredicted RBP15.9■□□□□ 0.14
SHANK2-210ENST00000449116 AKAP5P24588 427 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 PPP2R3AQ06190 1150 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 ENPEPQ07075 957 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 BFSP1Q12934 665 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 PSMD6Q15008 389 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 SURF1Q15526 300 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 SLC10A6Q3KNW5 377 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 C16orf59Q7L2K0 433 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 USP37Q86T82 979 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 ZNF598Q86UK7 904 aaKnown RBP15.9■□□□□ 0.14
SHANK2-210ENST00000449116 SNX27Q96L92 541 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 PLEKHA5Q9HAU0 1116 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 UBN1Q9NPG3 1134 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 TOPORSQ9NS56 1045 aaPredicted RBP15.9■□□□□ 0.14
SHANK2-210ENST00000449116 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
SHANK2-210ENST00000449116 TMEM161AQ9NX61 479 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 GIT1Q9Y2X7 761 aa15.9■□□□□ 0.14
SHANK2-210ENST00000449116 FGBP02675 491 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 ATP1A3P13637 1013 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 IBSPP21815 317 aaPredicted RBP15.89■□□□□ 0.13
SHANK2-210ENST00000449116 MTIF2P46199 727 aaKnown RBP15.89■□□□□ 0.13
SHANK2-210ENST00000449116 VAMP7P51809 220 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 MCCD1P59942 119 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms