RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 PRPF4BQ13523 1007 aaKnown RBP20.3■□□□□ 0.84
POLR1E-203ENST00000442009 KIF22Q14807 665 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 KIAA0319LQ8IZA0 1049 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 SLC30A5Q8TAD4 765 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 HELQQ8TDG4 1101 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 LENG1Q96BZ8 264 aaPredicted RBP20.3■□□□□ 0.84
POLR1E-203ENST00000442009 MYH10P35580 1976 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 RRN3P2A6NIE6 340 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 PHKA2P46019 1235 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 IRX5P78411 483 aaPredicted RBP20.3■□□□□ 0.84
POLR1E-203ENST00000442009 NOGQ13253 232 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 GRM1Q13255 1194 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 BRSK2Q8IWQ3 736 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 ZNF668Q96K58 619 aaPredicted RBP20.3■□□□□ 0.84
POLR1E-203ENST00000442009 KREMEN1Q96MU8 473 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 ARHGAP39Q9C0H5 1083 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 TNFSF13BQ9Y275 285 aa20.3■□□□□ 0.84
POLR1E-203ENST00000442009 A0A087WZ62 844 aa20.29■□□□□ 0.84
POLR1E-203ENST00000442009 INO80B-WBP1J3KQ70 363 aa20.29■□□□□ 0.84
POLR1E-203ENST00000442009 OGTO15294 1046 aa20.29■□□□□ 0.84
POLR1E-203ENST00000442009 B4GALT5O43286 388 aa20.29■□□□□ 0.84
POLR1E-203ENST00000442009 ZC3H11AO75152 810 aaKnown RBP eCLIP20.29■□□□□ 0.84
POLR1E-203ENST00000442009 LACTBP83111 547 aaPredicted RBP20.29■□□□□ 0.84
POLR1E-203ENST00000442009 ENOX2Q16206 610 aaKnown RBP20.29■□□□□ 0.84
POLR1E-203ENST00000442009 C10orf76Q5T2E6 689 aa20.29■□□□□ 0.84
POLR1E-203ENST00000442009 MPZL3Q6UWV2 235 aa20.29■□□□□ 0.84
POLR1E-203ENST00000442009 TRPV1Q8NER1 839 aa20.29■□□□□ 0.84
POLR1E-203ENST00000442009 FDXACB1Q9BRP7 624 aaPredicted RBP20.29■□□□□ 0.84
POLR1E-203ENST00000442009 INO80BQ9C086 356 aaPredicted RBP20.29■□□□□ 0.84
POLR1E-203ENST00000442009 PRMT7Q9NVM4 692 aaPredicted RBP20.29■□□□□ 0.84
POLR1E-203ENST00000442009 NAGPAQ9UK23 515 aa20.29■□□□□ 0.84
POLR1E-203ENST00000442009 CPSF3Q9UKF6 684 aaKnown RBP20.29■□□□□ 0.84
POLR1E-203ENST00000442009 MBLAC1A4D2B0 266 aaPredicted RBP20.28■□□□□ 0.84
POLR1E-203ENST00000442009 DDX3XO00571 662 aaKnown RBP eCLIP20.28■□□□□ 0.846e-19■■□□□ 11.6
POLR1E-203ENST00000442009 URI1O94763 535 aaPredicted RBP20.28■□□□□ 0.84
POLR1E-203ENST00000442009 PSMC4P43686 418 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 FCGRTP55899 365 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 ADAM17P78536 824 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 BMS1Q14692 1282 aaKnown RBP20.28■□□□□ 0.84
POLR1E-203ENST00000442009 NAB2Q15742 525 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 ARHGAP44Q17R89 818 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 ATF7IP2Q5U623 682 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 LMBR1Q8WVP7 490 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 SHC3Q92529 594 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 KAT5Q92993 513 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 FNBP1Q96RU3 617 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 CGRRF1Q99675 332 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 SETD4Q9NVD3 440 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 ANK1P16157 1881 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 ATP8B3O60423 1300 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 NRCAMQ92823 1304 aa20.28■□□□□ 0.84
POLR1E-203ENST00000442009 VTNP04004 478 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 CCDC172P0C7W6 258 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 TNFSF9P41273 254 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 MATR3P43243 847 aaKnown RBP eCLIP20.27■□□□□ 0.84
POLR1E-203ENST00000442009 CPT1AP50416 773 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 KIAA0753Q2KHM9 967 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 SEZ6Q53EL9 994 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 TDRD10Q5VZ19 366 aaKnown RBP20.27■□□□□ 0.84
POLR1E-203ENST00000442009 EEF1DP3Q658K8 133 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 FAM71AQ8IYT1 594 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 TXLNBQ8N3L3 684 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 FAM84AQ96KN4 292 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 TCHPQ9BT92 498 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.27■□□□□ 0.84
POLR1E-203ENST00000442009 SALL4Q9UJQ4 1053 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 AKT3Q9Y243 479 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 MRFAP1Q9Y605 127 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 CTAGE9A4FU28 777 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 VNN1O95497 513 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 SMIM10L2AP0DMW4 78 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 SMIM10L2BP0DMW5 78 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 ZBTB33Q86T24 672 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 GABRQQ9UN88 632 aa20.27■□□□□ 0.84
POLR1E-203ENST00000442009 DYNC1I1O14576 645 aa20.26■□□□□ 0.83
POLR1E-203ENST00000442009 SLU7O95391 586 aaKnown RBP20.26■□□□□ 0.83
POLR1E-203ENST00000442009 CYBAP13498 195 aa20.26■□□□□ 0.83
POLR1E-203ENST00000442009 TNNI1P19237 187 aa20.26■□□□□ 0.83
POLR1E-203ENST00000442009 CAP1Q01518 475 aa20.26■□□□□ 0.83
POLR1E-203ENST00000442009 NFRKBQ6P4R8 1299 aa20.26■□□□□ 0.83
POLR1E-203ENST00000442009 REM2Q8IYK8 340 aaPredicted RBP20.26■□□□□ 0.83
POLR1E-203ENST00000442009 RNF10Q8N5U6 811 aaKnown RBP20.26■□□□□ 0.83
POLR1E-203ENST00000442009 LNX1Q8TBB1 728 aaPredicted RBP20.26■□□□□ 0.83
POLR1E-203ENST00000442009 SECISBP2LQ93073 1101 aaKnown RBP20.26■□□□□ 0.83
POLR1E-203ENST00000442009 NT5C1BQ96P26 610 aa20.26■□□□□ 0.83
POLR1E-203ENST00000442009 NAPGQ99747 312 aaPredicted RBP20.26■□□□□ 0.83
POLR1E-203ENST00000442009 AP5M1Q9H0R1 490 aa20.26■□□□□ 0.83
POLR1E-203ENST00000442009 LUC7LQ9NQ29 371 aaKnown RBP20.26■□□□□ 0.83
POLR1E-203ENST00000442009 TRIP12Q14669 1992 aaPredicted RBP20.26■□□□□ 0.83
POLR1E-203ENST00000442009 CASP8AP2Q9UKL3 1982 aa20.26■□□□□ 0.83
POLR1E-203ENST00000442009 BTNL10A8MVZ5 291 aa20.25■□□□□ 0.83
POLR1E-203ENST00000442009 AOC2O75106 756 aa20.25■□□□□ 0.83
POLR1E-203ENST00000442009 DUSP11O75319 330 aaKnown RBP20.25■□□□□ 0.83
POLR1E-203ENST00000442009 AKR1A1P14550 325 aa20.25■□□□□ 0.83
POLR1E-203ENST00000442009 MFAP3P55082 362 aa20.25■□□□□ 0.83
POLR1E-203ENST00000442009 AMPD2Q01433 879 aa20.25■□□□□ 0.83
POLR1E-203ENST00000442009 GCNT1Q02742 428 aa20.25■□□□□ 0.83
POLR1E-203ENST00000442009 HIC1Q14526 733 aa20.25■□□□□ 0.83
POLR1E-203ENST00000442009 MFSD10Q14728 455 aa20.25■□□□□ 0.83
POLR1E-203ENST00000442009 LMBRD2Q68DH5 695 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms