RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 PCDHB12Q9Y5F1 795 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 COL4A4P53420 1690 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 DNAH12Q6ZR08 3092 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 COL4A6Q14031 1691 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 A0A1B0GVL5 298 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 MYMKA6NI61 221 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 CFAP99D6REC4 459 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 SLC26A4O43511 780 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 TRAK2O60296 914 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 ZNF623O75123 536 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 TBCAO75347 108 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 DDHD2O94830 711 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 YEATS4O95619 227 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 RB1P06400 928 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 LINC00271P0C7V0 271 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 HARSP12081 509 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 PLS3P13797 630 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 IDEP14735 1019 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 GUCY2CP25092 1073 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 DNAJB1P25685 340 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 NMT1P30419 496 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 CA8P35219 290 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 MATR3P43243 847 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 AFMP43652 599 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 ALDH7A1P49419 539 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 RAB27AP51159 221 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 EFNA5P52803 228 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 BCAR1P56945 870 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 ERVFC1P60507 584 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 KRT85P78386 507 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 KCNC4Q03721 635 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 STRN3Q13033 797 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 PCBP1Q15365 356 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 MSS51Q4VC12 460 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 ZC2HC1CQ53FD0 456 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 NAALADL2Q58DX5 795 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 NOMO2Q5JPE7 1267 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 TJAP1Q5JTD0 557 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 AXDND1Q5T1B0 1012 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 ATF7IP2Q5U623 682 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 CDCA2Q69YH5 1023 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 KCNT2Q6UVM3 1135 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 GLB1LQ6UWU2 654 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 CCDC73Q6ZRK6 1079 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 FAM43BQ6ZT52 329 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 HAUS6Q7Z4H7 955 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 RBM23Q86U06 439 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 COLGALT1Q8NBJ5 622 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 CNNM3Q8NE01 707 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 SPPL3Q8TCT6 385 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 URGCPQ8TCY9 931 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 POF1BQ8WVV4 589 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 CLP1Q92989 425 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 THAP11Q96EK4 314 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 PRIMPOLQ96LW4 560 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 ZFP42Q96MM3 310 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 SAMD11Q96NU1 681 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 GAD1Q99259 594 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 NTPCRQ9BSD7 190 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 TIPINQ9BVW5 301 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 TARS2Q9BW92 718 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 TRAIPQ9BWF2 469 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 CCDC113Q9H0I3 377 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 NXF3Q9H4D5 531 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 PDZD7Q9H5P4 517 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 NRDE2Q9H7Z3 1164 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 TBC1D13Q9NVG8 400 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 FAM13BQ9NYF5 915 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 LARSQ9P2J5 1176 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 DNAJB4Q9UDY4 337 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 KCNG1Q9UIX4 513 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 GDAQ9Y2T3 454 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 RWDD3Q9Y3V2 267 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 RBM19Q9Y4C8 960 aaKnown RBP6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 PCDHGC5Q9Y5F6 944 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 TRIP11Q15643 1979 aa6.34□□□□□ -1.39
HMGB3P24-201ENST00000433260 MYO9BQ13459 2157 aa6.34□□□□□ -1.4
HMGB3P24-201ENST00000433260 CNTNAP2Q9UHC6 1331 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 ARL5CA6NH57 179 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 C5orf67F2Z3F1 127 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 K7ENM7 598 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 N4BP3O15049 544 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 POLR2DO15514 142 aaKnown RBP6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZC3H11AO75152 810 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 FGF18O76093 207 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 ALDH2P05091 517 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 JUNDP17535 347 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 LAG3P18627 525 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 CASP1P29466 404 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 GTF2F1P35269 517 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 IRS1P35568 1242 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 MLH1P40692 756 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 OR1G1P47890 313 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 SCNN1GP51170 649 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 KRT17Q04695 432 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 CAMK1Q14012 370 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 PTPROQ16827 1216 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 FAM187BQ17R55 369 aa6.33□□□□□ -1.4
HMGB3P24-201ENST00000433260 ATL3Q6DD88 541 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms