RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 HSP90AA1P07900 732 aaKnown RBP25.04■■□□□ 1.6
HOMER3-203ENST00000433218 GJB2P29033 226 aa25.04■■□□□ 1.6
HOMER3-203ENST00000433218 CDC25AP30304 524 aa25.04■■□□□ 1.6
HOMER3-203ENST00000433218 FXR2P51116 673 aaKnown RBP eCLIP25.04■■□□□ 1.6
HOMER3-203ENST00000433218 DSG1Q02413 1049 aa25.04■■□□□ 1.6
HOMER3-203ENST00000433218 GNL2Q13823 731 aaKnown RBP25.04■■□□□ 1.6
HOMER3-203ENST00000433218 NAB2Q15742 525 aa25.04■■□□□ 1.6
HOMER3-203ENST00000433218 FAM187BQ17R55 369 aa25.04■■□□□ 1.6
HOMER3-203ENST00000433218 KCNK18Q7Z418 384 aa25.04■■□□□ 1.6
HOMER3-203ENST00000433218 LIMD1Q9UGP4 676 aa25.04■■□□□ 1.6
HOMER3-203ENST00000433218 COL4A3Q01955 1670 aa25.04■■□□□ 1.6
HOMER3-203ENST00000433218 SPDYE4A6NLX3 237 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 KIF4AO95239 1232 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 U2AF2P26368 475 aaKnown RBP eCLIP25.03■■□□□ 1.64e-7■■■□□ 17.8
HOMER3-203ENST00000433218 TCF15Q12870 199 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 PTGDRQ13258 359 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 ORC2Q13416 577 aaPredicted RBP25.03■■□□□ 1.6
HOMER3-203ENST00000433218 RTP2Q5QGT7 225 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 PRSS55Q6UWB4 352 aaPredicted RBP25.03■■□□□ 1.6
HOMER3-203ENST00000433218 PPFIBP1Q86W92 1011 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 ZBTB8OSQ8IWT0 167 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 ERMNQ8TAM6 284 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 PRIMPOLQ96LW4 560 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 CHST7Q9NS84 486 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 DDX19AQ9NUU7 478 aaKnown RBP25.03■■□□□ 1.6
HOMER3-203ENST00000433218 ADAM28Q9UKQ2 775 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 SORCS3Q9UPU3 1222 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 NCBP1Q09161 790 aaKnown RBP25.03■■□□□ 1.6
HOMER3-203ENST00000433218 PRPF4BQ13523 1007 aaKnown RBP25.03■■□□□ 1.6
HOMER3-203ENST00000433218 ATAT1Q5SQI0 421 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 DAW1Q8N136 415 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 IGSF22Q8N9C0 903 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 SNX29Q8TEQ0 813 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 RXFP1Q9HBX9 757 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 KIAA1024Q9UPX6 916 aa25.03■■□□□ 1.6
HOMER3-203ENST00000433218 ZMYM2Q9UBW7 1377 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 E9PMD0 336 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 NAMPTP43490 491 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 MTMR3Q13615 1198 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 BECN1Q14457 450 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 GLRA4Q5JXX5 417 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 NT5DC1Q5TFE4 455 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 HAUS3Q68CZ6 603 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 SUGP1Q8IWZ8 645 aaKnown RBP25.02■■□□□ 1.6
HOMER3-203ENST00000433218 INTS4Q96HW7 963 aaKnown RBP25.02■■□□□ 1.6
HOMER3-203ENST00000433218 MMTAG2Q9BU76 263 aaKnown RBP25.02■■□□□ 1.6
HOMER3-203ENST00000433218 RUSC1Q9BVN2 902 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 FOXD4L1Q9NU39 408 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 LRWD1Q9UFC0 647 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 GDAQ9Y2T3 454 aa25.02■■□□□ 1.6
HOMER3-203ENST00000433218 N4BP3O15049 544 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 GLUD1P00367 558 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 ADH1AP07327 375 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 TRAPPC10P48553 1259 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 CCDC149Q6ZUS6 474 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 PALB2Q86YC2 1186 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 HACE1Q8IYU2 909 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 ZDHHC14Q8IZN3 488 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 CEP120Q8N960 986 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 DEPTORQ8TB45 409 aa25.01■■□□□ 1.59
HOMER3-203ENST00000433218 RIN2Q8WYP3 895 aaPredicted RBP25.01■■□□□ 1.59
HOMER3-203ENST00000433218 ZNF707Q96C28 371 aaPredicted RBP25.01■■□□□ 1.59
HOMER3-203ENST00000433218 NOL7Q9UMY1 257 aaKnown RBP25.01■■□□□ 1.59
HOMER3-203ENST00000433218 MRE11P49959 708 aa25■■□□□ 1.59
HOMER3-203ENST00000433218 HSP90AA2PQ14568 343 aaPredicted RBP25■■□□□ 1.59
HOMER3-203ENST00000433218 MAPK6Q16659 721 aa25■■□□□ 1.59
HOMER3-203ENST00000433218 TMEM132AQ24JP5 1023 aa25■■□□□ 1.59
HOMER3-203ENST00000433218 TAS1R3Q7RTX0 852 aa25■■□□□ 1.59
HOMER3-203ENST00000433218 C2orf40Q9H1Z8 148 aa25■■□□□ 1.59
HOMER3-203ENST00000433218 FAM86C1Q9NVL1 165 aa25■■□□□ 1.59
HOMER3-203ENST00000433218 ACKR2O00590 384 aa24.99■■□□□ 1.59
HOMER3-203ENST00000433218 TGM5O43548 720 aa24.99■■□□□ 1.59
HOMER3-203ENST00000433218 MAPK7Q13164 816 aa24.99■■□□□ 1.59
HOMER3-203ENST00000433218 TUSC3Q13454 348 aa24.99■■□□□ 1.59
HOMER3-203ENST00000433218 ST13P5Q8NFI4 369 aaPredicted RBP24.99■■□□□ 1.59
HOMER3-203ENST00000433218 COLEC11Q9BWP8 271 aa24.99■■□□□ 1.59
HOMER3-203ENST00000433218 GOLGA2P5Q9HBQ8 144 aa24.99■■□□□ 1.59
HOMER3-203ENST00000433218 CCDC195A0A1B0GUA6 201 aa24.98■■□□□ 1.59
HOMER3-203ENST00000433218 ADAM12O43184 909 aa24.98■■□□□ 1.59
HOMER3-203ENST00000433218 KCNH6Q9H252 994 aa24.98■■□□□ 1.59
HOMER3-203ENST00000433218 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.98■■□□□ 1.59
HOMER3-203ENST00000433218 STK39Q9UEW8 545 aa24.98■■□□□ 1.59
HOMER3-203ENST00000433218 USTQ9Y2C2 406 aa24.98■■□□□ 1.59
HOMER3-203ENST00000433218 C15orf39Q6ZRI6 1047 aa24.97■■□□□ 1.59
HOMER3-203ENST00000433218 TMEM130Q8N3G9 435 aa24.97■■□□□ 1.59
HOMER3-203ENST00000433218 RSAD2Q8WXG1 361 aa24.97■■□□□ 1.59
HOMER3-203ENST00000433218 FRYLO94915 3013 aa24.97■■□□□ 1.59
HOMER3-203ENST00000433218 ZFHX2Q9C0A1 2572 aaPredicted RBP24.97■■□□□ 1.59
HOMER3-203ENST00000433218 CLUHO75153 1309 aa24.97■■□□□ 1.59
HOMER3-203ENST00000433218 H3BQV1 296 aa24.96■■□□□ 1.59
HOMER3-203ENST00000433218 NARSO43776 548 aaKnown RBP24.96■■□□□ 1.59
HOMER3-203ENST00000433218 HIP1RO75146 1068 aa24.96■■□□□ 1.59
HOMER3-203ENST00000433218 AVPR2P30518 371 aa24.96■■□□□ 1.59
HOMER3-203ENST00000433218 USP41Q3LFD5 358 aa24.96■■□□□ 1.59
HOMER3-203ENST00000433218 TMEM105Q8N8V8 129 aa24.96■■□□□ 1.59
HOMER3-203ENST00000433218 C3orf58Q8NDZ4 430 aa24.96■■□□□ 1.59
HOMER3-203ENST00000433218 CMASQ8NFW8 434 aaPredicted RBP24.96■■□□□ 1.59
HOMER3-203ENST00000433218 MYADMQ96S97 322 aa24.96■■□□□ 1.59
HOMER3-203ENST00000433218 SF3B1O75533 1304 aaKnown RBP eCLIP24.96■■□□□ 1.59
HOMER3-203ENST00000433218 MEFVO15553 781 aaPredicted RBP24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms