RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PIK3C3Q8NEB9 887 aa6.48□□□□□ -1.37
LINC00458-202ENST00000427299 BBC3Q96PG8 261 aaPredicted RBP6.48□□□□□ -1.37
LINC00458-202ENST00000427299 CPPED1Q9BRF8 314 aaPredicted RBP6.48□□□□□ -1.37
LINC00458-202ENST00000427299 NOL10Q9BSC4 688 aaKnown RBP6.48□□□□□ -1.37
LINC00458-202ENST00000427299 SLC46A2Q9BY10 475 aa6.48□□□□□ -1.37
LINC00458-202ENST00000427299 SYNPO2LQ9H987 977 aa6.48□□□□□ -1.37
LINC00458-202ENST00000427299 PTGFRNQ9P2B2 879 aa6.48□□□□□ -1.37
LINC00458-202ENST00000427299 PRDM15P57071 1507 aaPredicted RBP6.48□□□□□ -1.37
LINC00458-202ENST00000427299 FAM135AQ9P2D6 1515 aa6.48□□□□□ -1.37
LINC00458-202ENST00000427299 SMG6Q86US8 1419 aaKnown RBP6.48□□□□□ -1.37
LINC00458-202ENST00000427299 KIAA1210Q9ULL0 1709 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 PLB1Q6P1J6 1458 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 MAGI2Q86UL8 1455 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 IQGAP1P46940 1657 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 APOL3O95236 402 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 SDSP20132 328 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 FAM189BP81408 668 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 TAP1Q03518 808 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 VPS72Q15906 364 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 C21orf62-AS1Q17RA5 79 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 RNF187Q5TA31 235 aaPredicted RBP6.47□□□□□ -1.37
LINC00458-202ENST00000427299 OLFML1Q6UWY5 402 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 RTF1Q92541 710 aaKnown RBP6.47□□□□□ -1.37
LINC00458-202ENST00000427299 MFSD3Q96ES6 412 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 HIST1H2AHQ96KK5 128 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 HIST1H2AJQ99878 128 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 LSM14BQ9BX40 385 aaKnown RBP6.47□□□□□ -1.37
LINC00458-202ENST00000427299 PRKRIP1Q9H875 184 aaPredicted RBP6.47□□□□□ -1.37
LINC00458-202ENST00000427299 SPC25Q9HBM1 224 aa6.47□□□□□ -1.37
LINC00458-202ENST00000427299 INTS7Q9NVH2 962 aaKnown RBP6.47□□□□□ -1.37
LINC00458-202ENST00000427299 KIF15Q9NS87 1388 aa6.46□□□□□ -1.37
LINC00458-202ENST00000427299 LPXNO60711 386 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 DNAJC6O75061 913 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 IQSEC1Q6DN90 963 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 TTC37Q6PGP7 1564 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 Q6YL49 198 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 KRT26Q7Z3Y9 468 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 ADGRG3Q86Y34 549 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 THNSL2Q86YJ6 484 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 GLB1L3Q8NCI6 653 aaPredicted RBP6.46□□□□□ -1.38
LINC00458-202ENST00000427299 PRG4Q92954 1404 aaPredicted RBP6.46□□□□□ -1.38
LINC00458-202ENST00000427299 FAM193BQ96PV7 902 aaPredicted RBP6.46□□□□□ -1.38
LINC00458-202ENST00000427299 ZMAT4Q9H898 229 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 OXSMQ9NWU1 459 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 EIF2B4Q9UI10 523 aaKnown RBP6.46□□□□□ -1.38
LINC00458-202ENST00000427299 KIF7Q2M1P5 1343 aa6.46□□□□□ -1.38
LINC00458-202ENST00000427299 SYCP2Q9BX26 1530 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 INSRP06213 1382 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 SYNMO15061 1565 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 TMEM200CA6NKL6 621 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 APOBEC3AP31941 199 aaPredicted RBP6.45□□□□□ -1.38
LINC00458-202ENST00000427299 CASRP41180 1078 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 WNT3AP56704 352 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 C21orf58P58505 322 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 CD69Q07108 199 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 MRPL49Q13405 166 aaKnown RBP6.45□□□□□ -1.38
LINC00458-202ENST00000427299 PTPROQ16827 1216 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 TAF7LQ5H9L4 462 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 DOK3Q7L591 496 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 FAM83AQ86UY5 434 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 DHX37Q8IY37 1157 aaKnown RBP6.45□□□□□ -1.38
LINC00458-202ENST00000427299 ZZZ3Q8IYH5 903 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 LILRA3Q8N6C8 439 aaPredicted RBP6.45□□□□□ -1.38
LINC00458-202ENST00000427299 NDC1Q9BTX1 674 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 SERHL2Q9H4I8 314 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 TOMM22Q9NS69 142 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.45□□□□□ -1.38
LINC00458-202ENST00000427299 CFDP1Q9UEE9 299 aaPredicted RBP6.45□□□□□ -1.38
LINC00458-202ENST00000427299 DEPDC5O75140 1603 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 KDM5AP29375 1690 aaKnown RBP6.45□□□□□ -1.38
LINC00458-202ENST00000427299 DUOX2Q9NRD8 1548 aa6.45□□□□□ -1.38
LINC00458-202ENST00000427299 NEURL4Q96JN8 1562 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 ERBINQ96RT1 1412 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 GSG1L2A8MUP6 293 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 MASP2O00187 686 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 ELL2O00472 640 aaPredicted RBP6.44□□□□□ -1.38
LINC00458-202ENST00000427299 PCDH8O95206 1070 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 LY86O95711 162 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 JMJD7P0C870 316 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 POU3F3P20264 500 aaPredicted RBP6.44□□□□□ -1.38
LINC00458-202ENST00000427299 POU3F2P20265 443 aaPredicted RBP6.44□□□□□ -1.38
LINC00458-202ENST00000427299 CLK3P49761 638 aaKnown RBP6.44□□□□□ -1.38
LINC00458-202ENST00000427299 CDCA2Q69YH5 1023 aaPredicted RBP6.44□□□□□ -1.38
LINC00458-202ENST00000427299 OR5M3Q8NGP4 307 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 CYP4F11Q9HBI6 524 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 MAGEC2Q9UBF1 373 aaPredicted RBP6.44□□□□□ -1.38
LINC00458-202ENST00000427299 CHST2Q9Y4C5 530 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 PCDHB6Q9Y5E3 794 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 ARHGAP5Q13017 1502 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 ARAP3Q8WWN8 1544 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 ABCC2Q92887 1545 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 MYPNQ86TC9 1320 aa6.44□□□□□ -1.38
LINC00458-202ENST00000427299 BRD4O60885 1362 aaPredicted RBP6.44□□□□□ -1.38
LINC00458-202ENST00000427299 DHX29Q7Z478 1369 aaKnown RBP6.44□□□□□ -1.38
LINC00458-202ENST00000427299 TET3O43151 1660 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 KIAA0355O15063 1070 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 SEC24DO94855 1032 aaPredicted RBP6.43□□□□□ -1.38
LINC00458-202ENST00000427299 FLT3P36888 993 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 AMPD3Q01432 767 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 COLEC12Q5KU26 742 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms