RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 FIZ1Q96SL8 496 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 REEP2Q9BRK0 252 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 CCSER1Q9C0I3 900 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 NT5C3AQ9H0P0 336 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 IKZF4Q9H2S9 585 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 TNFSF13BQ9Y275 285 aa14.02□□□□□ -0.17
GPC1-204ENST00000426280 SRPRBQ9Y5M8 271 aaKnown RBP14.02□□□□□ -0.17
GPC1-204ENST00000426280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.01□□□□□ -0.17
GPC1-204ENST00000426280 CASTOR2A6NHX0 329 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 C2CD2LO14523 706 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 ZSCAN22P10073 491 aaPredicted RBP14.01□□□□□ -0.17
GPC1-204ENST00000426280 MAPTP10636 758 aaKnown RBP14.01□□□□□ -0.17
GPC1-204ENST00000426280 PROZP22891 400 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 SLC39A14Q15043 492 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 TMEM132AQ24JP5 1023 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 PUS10Q3MIT2 529 aaKnown RBP14.01□□□□□ -0.17
GPC1-204ENST00000426280 FOXD4L6Q3SYB3 417 aaPredicted RBP14.01□□□□□ -0.17
GPC1-204ENST00000426280 KIAA0319Q5VV43 1072 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 FOXD4L3Q6VB84 417 aaPredicted RBP14.01□□□□□ -0.17
GPC1-204ENST00000426280 HASPINQ8TF76 798 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 SPIRE2Q8WWL2 714 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 SUSD6Q92537 303 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 CDK5RAP3Q96JB5 506 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 DRC1Q96MC2 740 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 C11orf16Q9NQ32 467 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 ZDHHC9Q9Y397 364 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 IRAK3Q9Y616 596 aa14.01□□□□□ -0.17
GPC1-204ENST00000426280 MUC3AQ02505 3323 aa14□□□□□ -0.17
GPC1-204ENST00000426280 PHLPP2Q6ZVD8 1323 aa14□□□□□ -0.17
GPC1-204ENST00000426280 F13A1P00488 732 aa14□□□□□ -0.17
GPC1-204ENST00000426280 ANP32AP39687 249 aaKnown RBP14□□□□□ -0.17
GPC1-204ENST00000426280 SOX4Q06945 474 aaPredicted RBP14□□□□□ -0.17
GPC1-204ENST00000426280 GRIK3Q13003 919 aa14□□□□□ -0.17
GPC1-204ENST00000426280 DMP1Q13316 513 aaPredicted RBP14□□□□□ -0.17
GPC1-204ENST00000426280 ALKAL1Q6UXT8 129 aa14□□□□□ -0.17
GPC1-204ENST00000426280 ADHFE1Q8IWW8 467 aa14□□□□□ -0.17
GPC1-204ENST00000426280 RSPH1Q8WYR4 309 aa14□□□□□ -0.17
GPC1-204ENST00000426280 PPP2R3CQ969Q6 453 aa14□□□□□ -0.17
GPC1-204ENST00000426280 CALML4Q96GE6 196 aa14□□□□□ -0.17
GPC1-204ENST00000426280 ZMAT2Q96NC0 199 aaKnown RBP14□□□□□ -0.17
GPC1-204ENST00000426280 CDCA3Q99618 268 aaPredicted RBP14□□□□□ -0.17
GPC1-204ENST00000426280 HERC2P3Q9BVR0 1158 aa14□□□□□ -0.17
GPC1-204ENST00000426280 GOLGA2P5Q9HBQ8 144 aa14□□□□□ -0.17
GPC1-204ENST00000426280 RAPGEFL1Q9UHV5 662 aa14□□□□□ -0.17
GPC1-204ENST00000426280 RBM19Q9Y4C8 960 aaKnown RBP14□□□□□ -0.17
GPC1-204ENST00000426280 TTC28Q96AY4 2481 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 BMP15O95972 392 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 SOD2P04179 222 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 HARSP12081 509 aaKnown RBP13.99□□□□□ -0.17
GPC1-204ENST00000426280 NMT1P30419 496 aaKnown RBP13.99□□□□□ -0.17
GPC1-204ENST00000426280 SSTR3P32745 418 aaPredicted RBP13.99□□□□□ -0.17
GPC1-204ENST00000426280 DDIT3P35638 169 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 NCKAP1LP55160 1127 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 XKR4Q5GH76 650 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 PRSS55Q6UWB4 352 aaPredicted RBP13.99□□□□□ -0.17
GPC1-204ENST00000426280 HAUS6Q7Z4H7 955 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 LINC00301Q8NCQ3 95 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 C3orf58Q8NDZ4 430 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 PPP1R10Q96QC0 940 aaKnown RBP13.99□□□□□ -0.17
GPC1-204ENST00000426280 MRPL4Q9BYD3 311 aaKnown RBP13.99□□□□□ -0.17
GPC1-204ENST00000426280 ZSCAN16Q9H4T2 348 aaPredicted RBP13.99□□□□□ -0.17
GPC1-204ENST00000426280 CHST7Q9NS84 486 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 DAXXQ9UER7 740 aaPredicted RBP13.99□□□□□ -0.17
GPC1-204ENST00000426280 TDRD15B5MCY1 1934 aaKnown RBP13.99□□□□□ -0.17
GPC1-204ENST00000426280 CUL9Q8IWT3 2517 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 C5orf42Q9H799 3197 aa13.99□□□□□ -0.17
GPC1-204ENST00000426280 SMIM28A0A1B0GU29 152 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 MYMKA6NI61 221 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 TISP43B9A030 160 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 TEX28O15482 410 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 SLC26A4O43511 780 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 KIF4AO95239 1232 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 BRD1O95696 1058 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 THP07101 528 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 SPATA31D3P0C874 917 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 RPL17P18621 184 aaKnown RBP13.98□□□□□ -0.17
GPC1-204ENST00000426280 GRM5P41594 1212 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
GPC1-204ENST00000426280 ZNF131P52739 623 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 DSG1Q02413 1049 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 TUSC3Q13454 348 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 SLC10A6Q3KNW5 377 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 DCAF4L1Q3SXM0 396 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 ZC2HC1CQ53FD0 456 aaPredicted RBP13.98□□□□□ -0.17
GPC1-204ENST00000426280 RTP2Q5QGT7 225 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 ZBTB41Q5SVQ8 909 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 FUT10Q6P4F1 479 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 SPATA31D4Q6ZUB0 917 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 DYMQ7RTS9 669 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 HACE1Q8IYU2 909 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 KCTD17Q8N5Z5 321 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 MYCT1Q8N699 235 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 LARP4BQ92615 738 aaKnown RBP13.98□□□□□ -0.17
GPC1-204ENST00000426280 STAMQ92783 540 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 RPS6KC1Q96S38 1066 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 ADPGKQ9BRR6 497 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 TIPINQ9BVW5 301 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 COLEC11Q9BWP8 271 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 FGFBP2Q9BYJ0 223 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 C17orf75Q9HAS0 396 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms