RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 LAMP2P13473 410 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 LIG1P18858 919 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 ATP2B1P20020 1258 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 RARRES1P49788 294 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 FOSBP53539 338 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 ANAPC15P60006 121 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 TUSC3Q13454 348 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 AMHR2Q16671 573 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 EARS2Q5JPH6 523 aaKnown RBP17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 PPM1LQ5SGD2 360 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 PDXDC1Q6P996 788 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 PRSS55Q6UWB4 352 aaPredicted RBP17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 MCPH1Q8NEM0 835 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 HASPINQ8TF76 798 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 ZNF707Q96C28 371 aaPredicted RBP17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 SHDQ96IW2 340 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 PRIMPOLQ96LW4 560 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 C2orf40Q9H1Z8 148 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 ARHGEF3Q9NR81 526 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 TPCN1Q9ULQ1 816 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 SIT1Q9Y3P8 196 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 ZMYM2Q9UBW7 1377 aa17.23■□□□□ 0.35
SBDSP1-201ENST00000415772 A0A1B0GUA9 196 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 KRBA1A5PL33 1030 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 CASTOR2A6NHX0 329 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 N4BP3O15049 544 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 XYLBO75191 536 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 LMNAP02545 664 aaKnown RBP17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 THP07101 528 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 XRCC6P12956 609 aaKnown RBP eCLIP17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 ELAVL2Q12926 359 aaKnown RBP17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 PSMD5Q16401 504 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 FAM171A1Q5VUB5 890 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 DCLRE1AQ6PJP8 1040 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 ERMNQ8TAM6 284 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 HSD17B14Q9BPX1 270 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 TTPALQ9BTX7 342 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 NUMBLQ9Y6R0 609 aa17.22■□□□□ 0.35
SBDSP1-201ENST00000415772 ZFHX2Q9C0A1 2572 aaPredicted RBP17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 DCNP07585 359 aaKnown RBP17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 HNRNPA1P09651 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 PRPF4BQ13523 1007 aaKnown RBP17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 SAFBQ15424 915 aaKnown RBP eCLIP17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 MAPK6Q16659 721 aa17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 PHLDB3Q6NSJ2 640 aa17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 ERMP1Q7Z2K6 904 aa17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 GRASPQ7Z6J2 395 aaPredicted RBP17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 DIS3L2Q8IYB7 885 aaKnown RBP17.21■□□□□ 0.35
SBDSP1-201ENST00000415772 POTEMA6NI47 508 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 EFEMP2O95967 443 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 C8AP07357 584 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 RTP2Q5QGT7 225 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 LILRA6Q6PI73 481 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 MTSS1LQ765P7 747 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 APBB1IPQ7Z5R6 666 aaPredicted RBP17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 DEPTORQ8TB45 409 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 NACC1Q96RE7 527 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 TUFT1Q9NNX1 390 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 GPRC5CQ9NQ84 441 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 SNTG2Q9NY99 539 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 R4GN57 208 aa17.2■□□□□ 0.34
SBDSP1-201ENST00000415772 A0A087WWV3 80 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 ARHGEF35A5YM69 484 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 BTBD18B2RXH4 712 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 CCL16O15467 120 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 PRKCBP05771 671 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 MCM7P33993 719 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 HTR4Q13639 388 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 PPP2R5AQ15172 486 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 GSTCDQ8NEC7 633 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 ST13P5Q8NFI4 369 aaPredicted RBP17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 PIK3R5Q8WYR1 880 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 IFT74Q96LB3 600 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 SLC2A4RGQ9NR83 387 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 CACNG4Q9UBN1 327 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 FBXW11Q9UKB1 542 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 CDH7Q9ULB5 785 aa17.19■□□□□ 0.34
SBDSP1-201ENST00000415772 RECQL4O94761 1208 aa17.18■□□□□ 0.34
SBDSP1-201ENST00000415772 KIF4AO95239 1232 aa17.18■□□□□ 0.34
SBDSP1-201ENST00000415772 CTDNEP1O95476 244 aa17.18■□□□□ 0.34
SBDSP1-201ENST00000415772 GNL2Q13823 731 aaKnown RBP17.18■□□□□ 0.34
SBDSP1-201ENST00000415772 C1orf210Q8IVY1 113 aa17.18■□□□□ 0.34
SBDSP1-201ENST00000415772 PAAF1Q9BRP4 392 aa17.18■□□□□ 0.34
SBDSP1-201ENST00000415772 GDAQ9Y2T3 454 aa17.18■□□□□ 0.34
SBDSP1-201ENST00000415772 ANHXE9PGG2 379 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 TRAPPC3O43617 180 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 PFKPQ01813 784 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 FAM187BQ17R55 369 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 DCAF4L1Q3SXM0 396 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 NOSTRINQ8IVI9 506 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 PJA1Q8NG27 643 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 SLC7A14Q8TBB6 771 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 GTF3C6Q969F1 213 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 CLSTN3Q9BQT9 956 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 BCO2Q9BYV7 579 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 PDZD7Q9H5P4 517 aa17.17■□□□□ 0.34
SBDSP1-201ENST00000415772 LAMTOR5O43504 91 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms