RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 LAYNQ6UX15 382 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 SPATS2LQ9NUQ6 558 aaKnown RBP19.51■□□□□ 0.71
SHANK3-202ENST00000414786 ABCC12Q96J65 1359 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 NCF1BA6NI72 391 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-202ENST00000414786 NCF1CA8MVU1 366 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-202ENST00000414786 LZTS3O60299 673 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-202ENST00000414786 ATP1A1P05023 1023 aaKnown RBP19.51■□□□□ 0.71
SHANK3-202ENST00000414786 NCF1P14598 390 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-202ENST00000414786 SHROOM1Q2M3G4 852 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-202ENST00000414786 KAT2BQ92831 832 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 ZFYVE1Q9HBF4 777 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 GJB4Q9NTQ9 266 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 SLC9A2Q9UBY0 812 aa19.51■□□□□ 0.71
SHANK3-202ENST00000414786 LDHAP00338 332 aaKnown RBP19.5■□□□□ 0.71
SHANK3-202ENST00000414786 BTN2A1Q7KYR7 527 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 ADCK1Q86TW2 530 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 CLEC4FQ8N1N0 589 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 DHTKD1Q96HY7 919 aaPredicted RBP19.5■□□□□ 0.71
SHANK3-202ENST00000414786 SLC24A3Q9HC58 644 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 STAP1Q9ULZ2 295 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 POTEFA5A3E0 1075 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 NDUFS3O75489 264 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 MMEP08473 750 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 POTEIP0CG38 1075 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 POTEGQ6S5H5 508 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 POTEEQ6S8J3 1075 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 SH3BP5LQ7L8J4 393 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 KRT78Q8N1N4 520 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 MASTLQ96GX5 879 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 ASCC2Q9H1I8 757 aaPredicted RBP19.5■□□□□ 0.71
SHANK3-202ENST00000414786 OSGEPL1Q9H4B0 414 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 PCDHGA4Q9Y5G9 962 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 IQGAP2Q13576 1575 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 ARHGEF10O15013 1369 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 PRELPP51888 382 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 MTIF3Q9H2K0 278 aaKnown RBP19.5■□□□□ 0.71
SHANK3-202ENST00000414786 ZNF556Q9HAH1 456 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 TXNP10599 105 aaKnown RBP19.5■□□□□ 0.71
SHANK3-202ENST00000414786 UXS1Q8NBZ7 420 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 KDM1AO60341 852 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 FBXO18Q8NFZ0 1043 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 BBOX1O75936 387 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 ASNSP08243 561 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 CCDC81Q6ZN84 652 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 YIPF3Q9GZM5 350 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 DHX36Q9H2U1 1008 aaKnown RBP19.5■□□□□ 0.71
SHANK3-202ENST00000414786 RNPEPQ9H4A4 650 aa19.5■□□□□ 0.71
SHANK3-202ENST00000414786 FYNP06241 537 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 GUCA1AP43080 201 aaPredicted RBP19.49■□□□□ 0.71
SHANK3-202ENST00000414786 TSSK1BQ9BXA7 367 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 MARCOQ9UEW3 520 aaPredicted RBP19.49■□□□□ 0.71
SHANK3-202ENST00000414786 APPL1Q9UKG1 709 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 POTEB3A0JP26 581 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 POTECB2RU33 542 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 CYP27B1O15528 508 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 TSC22D2O75157 780 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 LRG1P02750 347 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 POTEBQ6S5H4 581 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 TMEM35BQ8NCS4 154 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 UTP6Q9NYH9 597 aaKnown RBP19.49■□□□□ 0.71
SHANK3-202ENST00000414786 PARNO95453 639 aaKnown RBP19.49■□□□□ 0.71
SHANK3-202ENST00000414786 DPYDQ12882 1025 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 PBKQ96KB5 322 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 TMEM143Q96AN5 459 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 GPR63Q9BZJ6 419 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 TOPBP1Q92547 1522 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 MTMR2Q13614 643 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 MAPRE1Q15691 268 aaKnown RBP19.49■□□□□ 0.71
SHANK3-202ENST00000414786 ALS2CLQ60I27 953 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 APOA5Q6Q788 366 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 CAMKK1Q8N5S9 505 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 ARHGEF3Q9NR81 526 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 FBXL21Q9UKT6 434 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 EFCAB5A4FU69 1503 aa19.49■□□□□ 0.71
SHANK3-202ENST00000414786 ENO1P06733 434 aaKnown RBP19.49■□□□□ 0.71
SHANK3-202ENST00000414786 AVPR1AP37288 418 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 PLD3Q8IV08 490 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 RBM41Q96IZ5 413 aaKnown RBP19.48■□□□□ 0.71
SHANK3-202ENST00000414786 MYCBPQ99417 103 aaPredicted RBP19.48■□□□□ 0.71
SHANK3-202ENST00000414786 RBAKQ9NYW8 714 aaPredicted RBP19.48■□□□□ 0.71
SHANK3-202ENST00000414786 NDOR1Q9UHB4 597 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 NR1D1P20393 614 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 BCAR1P56945 870 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 KDSRQ06136 332 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 DEPDC7Q96QD5 511 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 TARSL2A2RTX5 802 aaKnown RBP19.48■□□□□ 0.71
SHANK3-202ENST00000414786 ALDH1A3P47895 512 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 CDK17Q00537 523 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 NBPF15Q8N660 670 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 MRPL4Q9BYD3 311 aaKnown RBP19.48■□□□□ 0.71
SHANK3-202ENST00000414786 SNX9Q9Y5X1 595 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 KLHL18O94889 574 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 JAK3P52333 1124 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 ALKBH5Q6P6C2 394 aaKnown RBP19.48■□□□□ 0.71
SHANK3-202ENST00000414786 PAGE5Q96GU1 130 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 MED21Q13503 144 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 C16orf72Q14CZ0 275 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 HASPINQ8TF76 798 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 FAM49BQ9NUQ9 324 aa19.48■□□□□ 0.71
SHANK3-202ENST00000414786 ABI2Q9NYB9 513 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms