RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 COBLL1Q53SF7 1204 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 HACE1Q8IYU2 909 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 CASD1Q96PB1 797 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 GAD1Q99259 594 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 RAD9AQ99638 391 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 PBX4Q9BYU1 374 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 GOLGA8IPA6NC78 632 aa33.37■■■□□ 2.93
CSNK1E-206ENST00000413574 GOLGA8JA6NMD2 632 aa33.37■■■□□ 2.93
CSNK1E-206ENST00000413574 TBKBP1A7MCY6 615 aa33.37■■■□□ 2.93
CSNK1E-206ENST00000413574 MEFVO15553 781 aaPredicted RBP33.37■■■□□ 2.93
CSNK1E-206ENST00000413574 NOC3LQ8WTT2 800 aaKnown RBP33.37■■■□□ 2.93
CSNK1E-206ENST00000413574 CCDC94Q9BW85 323 aaPredicted RBP33.37■■■□□ 2.93
CSNK1E-206ENST00000413574 YBX2Q9Y2T7 364 aaKnown RBP33.37■■■□□ 2.93
CSNK1E-206ENST00000413574 INSL6Q9Y581 213 aa33.37■■■□□ 2.93
CSNK1E-206ENST00000413574 ABI1Q8IZP0 508 aa33.36■■■□□ 2.93
CSNK1E-206ENST00000413574 GTPBP4Q9BZE4 634 aaKnown RBP33.36■■■□□ 2.93
CSNK1E-206ENST00000413574 HCSTQ9UBK5 93 aa33.36■■■□□ 2.93
CSNK1E-206ENST00000413574 GIT1Q9Y2X7 761 aa33.36■■■□□ 2.93
CSNK1E-206ENST00000413574 TDRD15B5MCY1 1934 aaKnown RBP33.36■■■□□ 2.93
CSNK1E-206ENST00000413574 ARL5CA6NH57 179 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 PDXKO00764 312 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 CYP2J2P51589 502 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 KLHL10Q6JEL2 608 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 GLB1LQ6UWU2 654 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 CRELD2Q6UXH1 353 aaPredicted RBP33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 ACAP3Q96P50 834 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 FAM213AQ9BRX8 229 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 MIOSQ9NXC5 875 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 HSPBP1Q9NZL4 362 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 HOXA2O43364 376 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 ANK1P16157 1881 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 TMEM117Q9H0C3 514 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 UBN1Q9NPG3 1134 aa33.35■■■□□ 2.93
CSNK1E-206ENST00000413574 CXCL8P10145 99 aa33.34■■■□□ 2.93
CSNK1E-206ENST00000413574 PMS1P54277 932 aaKnown RBP33.34■■■□□ 2.93
CSNK1E-206ENST00000413574 LRIT3Q3SXY7 679 aa33.34■■■□□ 2.93
CSNK1E-206ENST00000413574 GSTCDQ8NEC7 633 aa33.34■■■□□ 2.93
CSNK1E-206ENST00000413574 SYAP1Q96A49 352 aaPredicted RBP33.34■■■□□ 2.93
CSNK1E-206ENST00000413574 CPSF3Q9UKF6 684 aaKnown RBP33.34■■■□□ 2.93
CSNK1E-206ENST00000413574 PCDHA11Q9Y5I1 949 aa33.34■■■□□ 2.93
CSNK1E-206ENST00000413574 TRIM49BA6NDI0 452 aa33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 ARHGEF15O94989 841 aa33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 CLTAP09496 248 aa33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 SNRPFP62306 86 aaKnown RBP33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 BTG3Q14201 252 aaPredicted RBP33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 ENOX2Q16206 610 aaKnown RBP33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 SKOR2Q2VWA4 1001 aaPredicted RBP33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 SLC10A6Q3KNW5 377 aa33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 DPCR1Q3MIW9 517 aa33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 ZCWPW2Q504Y3 356 aa33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 TRAF3IP3Q9Y228 551 aa33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 CHD7Q9P2D1 2997 aa33.33■■■□□ 2.93
CSNK1E-206ENST00000413574 POMCP01189 267 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 CA3P07451 260 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 SCNN1GP51170 649 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 YARSP54577 528 aaKnown RBP33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 NLRP12P59046 1061 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 STIM1Q13586 685 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 NOMO2Q5JPE7 1267 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 CENPPQ6IPU0 288 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 LRRC55Q6ZSA7 311 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 GOLGA5Q8TBA6 731 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 CGNQ9P2M7 1197 aaKnown RBP33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 PLAGL2Q9UPG8 496 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 KIAA1671Q9BY89 1806 aa33.32■■■□□ 2.92
CSNK1E-206ENST00000413574 CALUO43852 315 aaPredicted RBP33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 ANKRD40Q6AI12 368 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 GPD1LQ8N335 351 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 SP7Q8TDD2 431 aaPredicted RBP33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 CTNND2Q9UQB3 1225 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 RALGAPA2Q2PPJ7 1873 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 PDCD11Q14690 1871 aaKnown RBP33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 CDH23Q9H251 3354 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 PSMA7O14818 248 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 EXTL3O43909 919 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 NR3C1P04150 777 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 SMAD3P84022 425 aaKnown RBP33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 GLRA4Q5JXX5 417 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 C12orf56Q8IXR9 622 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 CMTR2Q8IYT2 770 aaKnown RBP33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 RDH13Q8NBN7 331 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 P2RX5Q93086 422 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 DHTKD1Q96HY7 919 aaPredicted RBP33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 SNX27Q96L92 541 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 NKX2-4Q9H2Z4 354 aa33.31■■■□□ 2.92
CSNK1E-206ENST00000413574 SOX1O00570 391 aaPredicted RBP33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 PTGESO14684 152 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 KYAT1Q16773 422 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 ALKAL1Q6UXT8 129 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 SPRED2Q7Z698 418 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 CBWD2Q8IUF1 395 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 NELFBQ8WX92 580 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 FAM212AQ96EL1 285 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 EEF2KMTQ96G04 330 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 RPF1Q9H9Y2 349 aaKnown RBP33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 TOPORSQ9NS56 1045 aaPredicted RBP33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 TBC1D13Q9NVG8 400 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 DMAC2Q9NW81 257 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 MSRAQ9UJ68 235 aa33.3■■■□□ 2.92
CSNK1E-206ENST00000413574 MRPL42Q9Y6G3 142 aaKnown RBP33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms