RNA–Protein interactions for RNA: ENST00000412134.5

LINC01249-201, Transcript of long intergenic non-protein coding RNA 1249, humanhuman

TSL 1 (best) BASIC

Gene LINC01249, Length 2,663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01249-201ENST00000412134 VPS53Q5VIR6 699 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 SYDE2Q5VT97 1194 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 CNKSR3Q6P9H4 555 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 SESTD1Q86VW0 696 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 LCORLQ8N3X6 602 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 CCDC155Q8N6L0 562 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 ZSCAN31Q96LW9 406 aaPredicted RBP5.67□□□□□ -1.5
LINC01249-201ENST00000412134 FAM227BQ96M60 508 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 DSCC1Q9BVC3 393 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 FTOQ9C0B1 505 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC01249-201ENST00000412134 CNNM2Q9H8M5 875 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 LUC7LQ9NQ29 371 aaKnown RBP5.67□□□□□ -1.5
LINC01249-201ENST00000412134 A1CFQ9NQ94 594 aaKnown RBP5.67□□□□□ -1.5
LINC01249-201ENST00000412134 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.67□□□□□ -1.5
LINC01249-201ENST00000412134 OBP2AQ9NY56 170 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 APOBEC2Q9Y235 224 aaKnown RBP5.67□□□□□ -1.5
LINC01249-201ENST00000412134 RBM8AQ9Y5S9 174 aaKnown RBP5.67□□□□□ -1.5
LINC01249-201ENST00000412134 CYP46A1Q9Y6A2 500 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 EPG5Q9HCE0 2579 aa5.67□□□□□ -1.5
LINC01249-201ENST00000412134 ATG2AQ2TAZ0 1938 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 A0A0D9SFI3 127 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 A0A1W2PQU0 124 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 WDR4P57081 412 aaKnown RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 HTRA4P83105 476 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 POU4F2Q12837 409 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 FOXD4Q12950 439 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 STAT4Q14765 748 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 ZMYM1Q5SVZ6 1142 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 CREB3L3Q68CJ9 461 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 KIAA1211LQ6NV74 962 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 GET4Q7L5D6 327 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 CPXCR1Q8N123 301 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 SNIP1Q8TAD8 396 aaKnown RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 KLHL6Q8WZ60 621 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 ANKS1AQ92625 1134 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 MTMR8Q96EF0 704 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 GBP4Q96PP9 640 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 ORAI3Q9BRQ5 295 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 SARGQ9BW04 601 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 IL25Q9H293 177 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 CXorf56Q9H5V9 222 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 FBRSQ9HAH7 460 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 RAVER2Q9HCJ3 691 aaKnown RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 ARHGEF4Q9NR80 690 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 USP25Q9UHP3 1055 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 PNMA8BQ9ULN7 279 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 ZNF292O60281 2723 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 VPS13AQ96RL7 3174 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 ZNF532Q9HCE3 1301 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 MYO7AQ13402 2215 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 NLRC5Q86WI3 1866 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 IGKV6D-41A0A0C4DH26 115 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 K7ESF4 209 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 TIMP2P16035 220 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 L1CAMP32004 1257 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 DEFB103AP81534 67 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 PTH1RQ03431 593 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 AP3B2Q13367 1082 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 CUL4AQ13619 759 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 SLC9C2Q5TAH2 1124 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 FOXB2Q5VYV0 432 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 FIGNL1Q6PIW4 674 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 KRBA2Q6ZNG9 492 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 TRIM67Q6ZTA4 783 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 LYSMD3Q7Z3D4 306 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 KIF18BQ86Y91 864 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 SDR16C5Q8N3Y7 309 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 PNMA5Q96PV4 448 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 NUP88Q99567 741 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 NUCKS1Q9H1E3 243 aaKnown RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 POLMQ9NP87 494 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 PDGFCQ9NRA1 345 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 SH2B1Q9NRF2 756 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 ISY1Q9ULR0 285 aaKnown RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 LIMCH1Q9UPQ0 1083 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 SMC3Q9UQE7 1217 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 INSL6Q9Y581 213 aa5.66□□□□□ -1.5
LINC01249-201ENST00000412134 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 CTDP1Q9Y5B0 961 aaPredicted RBP5.66□□□□□ -1.5
LINC01249-201ENST00000412134 H3BNC9 293 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 H3BQ06 376 aaPredicted RBP5.65□□□□□ -1.5
LINC01249-201ENST00000412134 SLC27A2O14975 620 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 NKRFO15226 690 aaKnown RBP eCLIP5.65□□□□□ -1.5
LINC01249-201ENST00000412134 PLA2G6O60733 806 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 HTR3BO95264 441 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 TPM3P06753 285 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 SELPP16109 830 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 BPIP17213 487 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 LIG1P18858 919 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 CASTP20810 708 aaKnown RBP5.65□□□□□ -1.5
LINC01249-201ENST00000412134 BDNFP23560 247 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 MINDY4Q4G0A6 757 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 TMEM201Q5SNT2 666 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 RUFY3Q7L099 469 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 NLRC3Q7RTR2 1065 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 FBXO16Q8IX29 292 aaPredicted RBP5.65□□□□□ -1.5
LINC01249-201ENST00000412134 GMCL1P1Q8NEA9 526 aa5.65□□□□□ -1.5
LINC01249-201ENST00000412134 LEO1Q8WVC0 666 aaPredicted RBP5.65□□□□□ -1.5
LINC01249-201ENST00000412134 BSNDQ8WZ55 320 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms