RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CDO1Q16878 200 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 MREGQ8N565 214 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 SYTL5Q8TDW5 730 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-204ENST00000409416 YY1AP1Q9H869 796 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 PLIN4Q96Q06 1357 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 POC1B-GALNT4F8VUJ3 575 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 SLC16A3O15427 465 aaKnown RBP14.33□□□□□ -0.12
COL6A2-204ENST00000409416 MAPK4P31152 587 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 ADCY8P40145 1251 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 EPM2AIP1Q7L775 607 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-204ENST00000409416 UBL4BQ8N7F7 174 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 FLAD1Q8NFF5 587 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 NT5C1BQ96P26 610 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 POLR3FQ9H1D9 316 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-204ENST00000409416 SLITRK6Q9H5Y7 841 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 DDX20Q9UHI6 824 aaKnown RBP14.33□□□□□ -0.12
COL6A2-204ENST00000409416 CYP3A7-CYP3A51PA0A087WV96 503 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 WDR91A4D1P6 747 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 GRAP2O75791 330 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 ADRB2P07550 413 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 CYP3A7P24462 503 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 PRKCIP41743 596 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 PMS2P54278 862 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 SMTNL2Q2TAL5 461 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 Q4G0T1 1027 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 GKAP1Q5VSY0 366 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-204ENST00000409416 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 C1orf186Q6ZWK4 172 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 JAMLQ86YT9 394 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 CALR3Q96L12 384 aaKnown RBP14.33□□□□□ -0.12
COL6A2-204ENST00000409416 C1orf112Q9NSG2 853 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 PCSK1NQ9UHG2 260 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 COG5Q9UP83 839 aa14.33□□□□□ -0.12
COL6A2-204ENST00000409416 RARRES1P49788 294 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 CALCOCO2Q13137 446 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 E2F5Q15329 346 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 DCAF12L1Q5VU92 463 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 BSPRYQ5W0U4 402 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 CCDC13Q8IYE1 715 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 NEK9Q8TD19 979 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 SEC16BQ96JE7 1060 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 AGPAT1Q99943 283 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 IDI2Q9BXS1 227 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 ZWILCHQ9H900 591 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 HAUS2Q9NVX0 235 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 HERC5Q9UII4 1024 aaKnown RBP14.32□□□□□ -0.12
COL6A2-204ENST00000409416 TMEM59LQ9UK28 342 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 RREB1Q92766 1687 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 K7ERI5 159 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 SLC29A2Q14542 456 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 ZBTB41Q5SVQ8 909 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 UBAP2Q5T6F2 1119 aaKnown RBP14.32□□□□□ -0.12
COL6A2-204ENST00000409416 NAP1L3Q99457 506 aaPredicted RBP14.32□□□□□ -0.12
COL6A2-204ENST00000409416 CXorf56Q9H5V9 222 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 ELP3Q9H9T3 547 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 TBX3O15119 743 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 RGL2O15211 777 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 ENTPD3O75355 529 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 TMEM253P0C7T8 217 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 JAM2P57087 298 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 MRPS9P82933 396 aaKnown RBP14.32□□□□□ -0.12
COL6A2-204ENST00000409416 ATP13A4Q4VNC1 1196 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 FAM133BQ5BKY9 247 aaKnown RBP14.32□□□□□ -0.12
COL6A2-204ENST00000409416 SCYL2Q6P3W7 929 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 HOOK3Q86VS8 718 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 C9orf72Q96LT7 481 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 TMEM117Q9H0C3 514 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 SUFUQ9UMX1 484 aa14.32□□□□□ -0.12
COL6A2-204ENST00000409416 PSMD10O75832 226 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 KRT10P13645 584 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 CHN1P15882 459 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 NPTX2P47972 431 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 IFI35P80217 286 aaPredicted RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 KCNV1Q6PIU1 500 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 POTEAQ6S8J7 498 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 LRIG3Q6UXM1 1119 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 EPS8L3Q8TE67 593 aaKnown RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 HES6Q96HZ4 224 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 HSD17B14Q9BPX1 270 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 ELAC2Q9BQ52 826 aaKnown RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 ERP44Q9BS26 406 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 SEMA4AQ9H3S1 761 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 MTRF1LQ9UGC7 380 aaKnown RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 HOXA7P31268 230 aaPredicted RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 CD302Q8IX05 232 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 NETO2Q8NC67 525 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 ZNF564Q8TBZ8 553 aaPredicted RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 POLR3CQ9BUI4 534 aaPredicted RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 ALG13Q9NP73 1137 aaKnown RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 FEM1BQ9UK73 627 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 IGLV3-22A0A075B6J6 115 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 PRKCEQ02156 737 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 LONRF1Q17RB8 773 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 SGO2Q562F6 1265 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 CYP4A22Q5TCH4 519 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 CCDC137Q6PK04 289 aaKnown RBP14.31□□□□□ -0.12
COL6A2-204ENST00000409416 RHPN2Q8IUC4 686 aa14.31□□□□□ -0.12
COL6A2-204ENST00000409416 SEMA4DQ92854 862 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms