RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 AKAP5P24588 427 aa18.58■□□□□ 0.56
CHMP3-203ENST00000409225 TARSP26639 723 aaKnown RBP18.58■□□□□ 0.56
CHMP3-203ENST00000409225 NTRK3Q16288 839 aa18.58■□□□□ 0.56
CHMP3-203ENST00000409225 HASPINQ8TF76 798 aa18.58■□□□□ 0.56
CHMP3-203ENST00000409225 NELL1Q92832 810 aa18.58■□□□□ 0.56
CHMP3-203ENST00000409225 KLK14Q9P0G3 267 aa18.58■□□□□ 0.56
CHMP3-203ENST00000409225 DDX25Q9UHL0 483 aaKnown RBP18.58■□□□□ 0.56
CHMP3-203ENST00000409225 PPME1Q9Y570 386 aa18.58■□□□□ 0.56
CHMP3-203ENST00000409225 INO80B-WBP1J3KQ70 363 aa18.57■□□□□ 0.56
CHMP3-203ENST00000409225 DKC1O60832 514 aaKnown RBP eCLIP18.57■□□□□ 0.56
CHMP3-203ENST00000409225 XYLBO75191 536 aa18.57■□□□□ 0.56
CHMP3-203ENST00000409225 NCBP1Q09161 790 aaKnown RBP18.57■□□□□ 0.56
CHMP3-203ENST00000409225 CEP57Q86XR8 500 aa18.57■□□□□ 0.56
CHMP3-203ENST00000409225 HACE1Q8IYU2 909 aa18.57■□□□□ 0.56
CHMP3-203ENST00000409225 GSTCDQ8NEC7 633 aa18.57■□□□□ 0.56
CHMP3-203ENST00000409225 CLDN23Q96B33 292 aa18.57■□□□□ 0.56
CHMP3-203ENST00000409225 CLSTN3Q9BQT9 956 aa18.57■□□□□ 0.56
CHMP3-203ENST00000409225 SH3GLB2Q9NR46 395 aa18.57■□□□□ 0.56
CHMP3-203ENST00000409225 PCDHA4Q9UN74 947 aa18.57■□□□□ 0.56
CHMP3-203ENST00000409225 SF3B1O75533 1304 aaKnown RBP eCLIP18.56■□□□□ 0.56
CHMP3-203ENST00000409225 MAP1BP46821 2468 aaKnown RBP18.56■□□□□ 0.56
CHMP3-203ENST00000409225 NCAM2O15394 837 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 SLC37A4O43826 429 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 P4HBP07237 508 aaKnown RBP18.56■□□□□ 0.56
CHMP3-203ENST00000409225 ADRB1P08588 477 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 IFNAR1P17181 557 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 PTENP60484 403 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 GRIK3Q13003 919 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 PPP2R5CQ13362 524 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 HSP90AA2PQ14568 343 aaPredicted RBP18.56■□□□□ 0.56
CHMP3-203ENST00000409225 PCBP1Q15365 356 aaKnown RBP eCLIP18.56■□□□□ 0.56
CHMP3-203ENST00000409225 PSMD5Q16401 504 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 LPAL2Q16609 132 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 XKR9Q5GH70 373 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 CDR2LQ86X02 465 aaPredicted RBP18.56■□□□□ 0.56
CHMP3-203ENST00000409225 ING5Q8WYH8 240 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 MTRQ99707 1265 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 PAAF1Q9BRP4 392 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 LXNQ9BS40 222 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 TTPALQ9BTX7 342 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 PRMT8Q9NR22 394 aaPredicted RBP18.56■□□□□ 0.56
CHMP3-203ENST00000409225 HCFC1R1Q9NWW0 138 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 PARP2Q9UGN5 583 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 VAV3Q9UKW4 847 aa18.56■□□□□ 0.56
CHMP3-203ENST00000409225 NPTXRO95502 500 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 ARF4P18085 180 aaPredicted RBP18.55■□□□□ 0.56
CHMP3-203ENST00000409225 YWHABP31946 246 aaKnown RBP18.55■□□□□ 0.56
CHMP3-203ENST00000409225 CCT2P78371 535 aaKnown RBP18.55■□□□□ 0.56
CHMP3-203ENST00000409225 SPEM2Q0P670 501 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 FAM171A1Q5VUB5 890 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 MOXD1Q6UVY6 613 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 ZNF852Q6ZMS4 543 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 NPAS3Q8IXF0 933 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 BLIDQ8IZY5 108 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 SLC7A14Q8TBB6 771 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 CHAMP1Q96JM3 812 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 NELL2Q99435 816 aa18.55■□□□□ 0.56
CHMP3-203ENST00000409225 NCOA5Q9HCD5 579 aaKnown RBP18.55■□□□□ 0.56
CHMP3-203ENST00000409225 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.55■□□□□ 0.56
CHMP3-203ENST00000409225 ZBTB39O15060 712 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 ADAM12O43184 909 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 B4GALT5O43286 388 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 HOXA9P31269 272 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 RPS9P46781 194 aaKnown RBP18.54■□□□□ 0.56
CHMP3-203ENST00000409225 MBTD1Q05BQ5 628 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 MTAPQ13126 283 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 AMHR2Q16671 573 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 INF2Q27J81 1249 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 PABPC1LQ4VXU2 614 aaKnown RBP18.54■□□□□ 0.56
CHMP3-203ENST00000409225 PPM1JQ5JR12 505 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 OTUD6AQ7L8S5 288 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 LNX1Q8TBB1 728 aaPredicted RBP18.54■□□□□ 0.56
CHMP3-203ENST00000409225 PIK3R5Q8WYR1 880 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
CHMP3-203ENST00000409225 HEBP1Q9NRV9 189 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 RGL1Q9NZL6 768 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 RAB23Q9ULC3 237 aa18.54■□□□□ 0.56
CHMP3-203ENST00000409225 CASTOR2A6NHX0 329 aa18.53■□□□□ 0.56
CHMP3-203ENST00000409225 KIF4AO95239 1232 aa18.53■□□□□ 0.56
CHMP3-203ENST00000409225 TFDP1Q14186 410 aa18.53■□□□□ 0.56
CHMP3-203ENST00000409225 MXD4Q14582 209 aaPredicted RBP18.53■□□□□ 0.56
CHMP3-203ENST00000409225 AXDND1Q5T1B0 1012 aaPredicted RBP18.53■□□□□ 0.56
CHMP3-203ENST00000409225 C4orf19Q8IY42 314 aa18.53■□□□□ 0.56
CHMP3-203ENST00000409225 ASAP3Q8TDY4 903 aa18.53■□□□□ 0.56
CHMP3-203ENST00000409225 MCRS1Q96EZ8 462 aa18.53■□□□□ 0.56
CHMP3-203ENST00000409225 DYDC2Q96IM9 177 aa18.53■□□□□ 0.56
CHMP3-203ENST00000409225 PLA2G2FQ9BZM2 168 aa18.53■□□□□ 0.56
CHMP3-203ENST00000409225 XPNPEP1Q9NQW7 623 aa18.53■□□□□ 0.56
CHMP3-203ENST00000409225 DNMT3BQ9UBC3 853 aaKnown RBP18.53■□□□□ 0.56
CHMP3-203ENST00000409225 NDRG2Q9UN36 371 aaKnown RBP18.53■□□□□ 0.56
CHMP3-203ENST00000409225 MRPS17Q9Y2R5 130 aaKnown RBP18.53■□□□□ 0.56
CHMP3-203ENST00000409225 M0R2N6 131 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 ADCY1Q08828 1119 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 TUSC3Q13454 348 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 FZD5Q13467 585 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 CAPSQ13938 189 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 CTTNQ14247 550 aaKnown RBP18.52■□□□□ 0.56
CHMP3-203ENST00000409225 EPHA7Q15375 998 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 NCAPH2Q6IBW4 605 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 SLC27A1Q6PCB7 646 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms