RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 HNRNPCL1O60812 293 aaKnown RBP13.63□□□□□ -0.23
HERC3-203ENST00000407637 TTC4O95801 387 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 PYGMP11217 842 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 ANPEPP15144 967 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 CTNNA2P26232 953 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 PHEXP78562 749 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 SPDYAQ5MJ70 313 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 CCDC174Q6PII3 467 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 RINLQ6ZS11 566 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 PTCD3Q96EY7 689 aaKnown RBP13.63□□□□□ -0.23
HERC3-203ENST00000407637 CEP63Q96MT8 703 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 CYTH2Q99418 400 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 PTTG2Q9NZH5 202 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 DCTN4Q9UJW0 460 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 SYNGAP1Q96PV0 1343 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 TNRQ92752 1358 aa13.63□□□□□ -0.23
HERC3-203ENST00000407637 SPDYE16A6NNV3 312 aaPredicted RBP13.62□□□□□ -0.23
HERC3-203ENST00000407637 SNAP23O00161 211 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 PLSCR1O15162 318 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 TP73O15350 636 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 ZNF862O60290 1169 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 ATP8B3O60423 1300 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 E2F6O75461 281 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 PDE8BO95263 885 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 CSF1RP07333 972 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 ALOX15P16050 662 aaPredicted RBP13.62□□□□□ -0.23
HERC3-203ENST00000407637 EVX2Q03828 476 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 SLC44A4Q53GD3 710 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 PLEKHG4Q58EX7 1191 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 CYFIP1Q7L576 1253 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 OTOAQ7RTW8 1153 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 ADGRA1Q86SQ6 560 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
HERC3-203ENST00000407637 PPP2R3CQ969Q6 453 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 PRR11Q96HE9 360 aaPredicted RBP13.62□□□□□ -0.23
HERC3-203ENST00000407637 SPATA7Q9P0W8 599 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 LGALS13Q9UHV8 139 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 AXIN2Q9Y2T1 843 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 TDRKHQ9Y2W6 561 aaKnown RBP13.62□□□□□ -0.23
HERC3-203ENST00000407637 C2CD2LO14523 706 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 HAUS5O94927 633 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 CHRNB2P17787 502 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 MUTP22033 750 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 MLH1P40692 756 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 TXKP42681 527 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 MAP3K10Q02779 954 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 COASYQ13057 564 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 UBE4AQ14139 1066 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 SYDE2Q5VT97 1194 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 ACAD11Q709F0 780 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 HEATR3Q7Z4Q2 680 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 GLYCTKQ8IVS8 523 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 C17orf50Q8WW18 174 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 PWWP2AQ96N64 755 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 SIKE1Q9BRV8 207 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 ZNF711Q9Y462 761 aa13.62□□□□□ -0.23
HERC3-203ENST00000407637 SMIM31A0A1B0GVY4 71 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 TMEM110-MUSTN1A8MSY1 372 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 PGM3O95394 542 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 CDK4P11802 303 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 PON1P27169 355 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 COILP38432 576 aaPredicted RBP13.61□□□□□ -0.23
HERC3-203ENST00000407637 RGS2P41220 211 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 VPS41P49754 854 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 OXCT1P55809 520 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 GPSM2P81274 684 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 FAM47AQ5JRC9 791 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 KCNK18Q7Z418 384 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 PHLDB2Q86SQ0 1253 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 ANKRD35Q8N283 1001 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.61□□□□□ -0.23
HERC3-203ENST00000407637 MKL1Q969V6 931 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 PPP1R14BQ96C90 147 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 SMC6Q96SB8 1091 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 SPZ1Q9BXG8 430 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 NINJ2Q9NZG7 142 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 COG5Q9UP83 839 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 TOM1O60784 492 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 CDH16O75309 829 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 ZWINTO95229 277 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 BAG2O95816 211 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 FGFR1P11362 822 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 CRABP2P29373 138 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 CD97P48960 835 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 MARSP56192 900 aaKnown RBP13.61□□□□□ -0.23
HERC3-203ENST00000407637 SPARCL1Q14515 664 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 PDK4Q16654 411 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 RAPH1Q70E73 1250 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 PTF1AQ7RTS3 328 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 SLF2Q8IX21 1173 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 OLIG1Q8TAK6 271 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 RAPGEF4Q8WZA2 1011 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 FAM161BQ96MY7 647 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 TTC1Q99614 292 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 NDE1Q9NXR1 346 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 KANSL3Q9P2N6 904 aa13.61□□□□□ -0.23
HERC3-203ENST00000407637 ZNF330Q9Y3S2 320 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms