RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 PTPN22Q9Y2R2 807 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 VIMP08670 466 aaKnown RBP15.32■□□□□ 0.04
GABPA-202ENST00000400075 RAB27AP51159 221 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 KRT71Q3SY84 523 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 PRAMEF19Q5SWL8 479 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 RAPH1Q70E73 1250 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 CD302Q8IX05 232 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 LCMT1Q9UIC8 334 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 GNL1P36915 607 aaPredicted RBP15.32■□□□□ 0.04
GABPA-202ENST00000400075 ZNF235Q14590 738 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 IQCB1Q15051 598 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 GRIK5Q16478 980 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 MCUQ8NE86 351 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 REPS2Q8NFH8 660 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 HPDLQ96IR7 371 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 PDGFDQ9GZP0 370 aaPredicted RBP15.32■□□□□ 0.04
GABPA-202ENST00000400075 CEP72Q9P209 647 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 HEY1Q9Y5J3 304 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 ARHGEF28Q8N1W1 1705 aaKnown RBP15.32■□□□□ 0.04
GABPA-202ENST00000400075 CLGNO14967 610 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 CTXN3Q4LDR2 81 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 TTC23LQ6PF05 361 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 FRMD5Q7Z6J6 570 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 EPAS1Q99814 870 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 FSD1LQ9BXM9 530 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 MRPL9Q9BYD2 267 aaKnown RBP15.32■□□□□ 0.04
GABPA-202ENST00000400075 DHX35Q9H5Z1 703 aaKnown RBP15.32■□□□□ 0.04
GABPA-202ENST00000400075 NAGPAQ9UK23 515 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 PI4K2BG5E9Z4 385 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 ONECUT3O60422 494 aaPredicted RBP15.32■□□□□ 0.04
GABPA-202ENST00000400075 SOX5P35711 763 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 NAMPTP43490 491 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 FXR2P51116 673 aaKnown RBP eCLIP15.32■□□□□ 0.04
GABPA-202ENST00000400075 ATP11AP98196 1134 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 AMPD2Q01433 879 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 MED15Q96RN5 788 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 ABCF3Q9NUQ8 709 aa15.32■□□□□ 0.04
GABPA-202ENST00000400075 HSPA6P17066 643 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 RWDD2BP57060 319 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 NUDCD1Q96RS6 583 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 TRIM56Q9BRZ2 755 aaKnown RBP15.31■□□□□ 0.04
GABPA-202ENST00000400075 SMYD2Q9NRG4 433 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.31■□□□□ 0.04
GABPA-202ENST00000400075 PTPN21Q16825 1174 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 CCDC144BQ3MJ40 725 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 TDRD10Q5VZ19 366 aaKnown RBP15.31■□□□□ 0.04
GABPA-202ENST00000400075 C18orf8Q96DM3 657 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 FAM49BQ9NUQ9 324 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 IRF1P10914 325 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 ELNP15502 786 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 CCL23P55773 120 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 CCDC15Q0P6D6 951 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 ZC2HC1CQ53FD0 456 aaPredicted RBP15.31■□□□□ 0.04
GABPA-202ENST00000400075 ZNF280DQ6N043 979 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 DAGLBQ8NCG7 672 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 UCMAQ8WVF2 138 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 KLRC2P26717 231 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 GPC5P78333 572 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 HDXQ7Z353 690 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 ANKRD23Q86SG2 305 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 RBM41Q96IZ5 413 aaKnown RBP15.31■□□□□ 0.04
GABPA-202ENST00000400075 KIFC3Q9BVG8 833 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 FBXO2Q9UK22 296 aaPredicted RBP15.31■□□□□ 0.04
GABPA-202ENST00000400075 DOLKQ9UPQ8 538 aa15.31■□□□□ 0.04
GABPA-202ENST00000400075 MROH7Q68CQ1 1323 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 LGALS16A8MUM7 142 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 INHBAP08476 426 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 RGS7P49802 495 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 RPL10AP62906 217 aaKnown RBP15.3■□□□□ 0.04
GABPA-202ENST00000400075 DDX27Q96GQ7 796 aaKnown RBP15.3■□□□□ 0.04
GABPA-202ENST00000400075 TRPV6Q9H1D0 765 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 SUDS3Q9H7L9 328 aaPredicted RBP15.3■□□□□ 0.04
GABPA-202ENST00000400075 EFCAB8A8MWE9 144 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 EXTL3O43909 919 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
GABPA-202ENST00000400075 HARS2P49590 506 aaKnown RBP15.3■□□□□ 0.04
GABPA-202ENST00000400075 GJC2Q5T442 439 aaPredicted RBP15.3■□□□□ 0.04
GABPA-202ENST00000400075 VGLL2Q8N8G2 317 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 CHMP6Q96FZ7 201 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 NHEJ1Q9H9Q4 299 aaPredicted RBP15.3■□□□□ 0.04
GABPA-202ENST00000400075 JRKLQ9Y4A0 524 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 MYMKA6NI61 221 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 H3BRJ5 948 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 TOM1L1O75674 476 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 KRT7P08729 469 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 SHC4Q6S5L8 630 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 VPS39Q96JC1 886 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 SYNDIG1Q9H7V2 258 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 AGO4Q9HCK5 861 aaKnown RBP15.3■□□□□ 0.04
GABPA-202ENST00000400075 SPTLC3Q9NUV7 552 aa15.3■□□□□ 0.04
GABPA-202ENST00000400075 TCRBV5S4A2TA0A5A2 114 aa15.29■□□□□ 0.04
GABPA-202ENST00000400075 PRMT2P55345 433 aa15.29■□□□□ 0.04
GABPA-202ENST00000400075 SNRPFP62306 86 aaKnown RBP15.29■□□□□ 0.04
GABPA-202ENST00000400075 WHAMMP3Q1A5X7 153 aa15.29■□□□□ 0.04
GABPA-202ENST00000400075 C10orf120Q5SQS8 335 aa15.29■□□□□ 0.04
GABPA-202ENST00000400075 SLAIN1Q8ND83 568 aa15.29■□□□□ 0.04
GABPA-202ENST00000400075 HPS3Q969F9 1004 aa15.29■□□□□ 0.04
GABPA-202ENST00000400075 SRGAP2O75044 1071 aa15.29■□□□□ 0.04
GABPA-202ENST00000400075 TJP3O95049 919 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms