RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 HVCN1Q96D96 273 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 PARD6BQ9BYG5 372 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 A0A087WZ62 844 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 NAMPTP43490 491 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 DR1Q01658 176 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 TMEM132BQ14DG7 1078 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 TRIM72Q6ZMU5 477 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 VSIG10LQ86VR7 867 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 RUNDC3BQ96NL0 473 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 FDXACB1Q9BRP7 624 aaPredicted RBP13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 FAM49BQ9NUQ9 324 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 CYP39A1Q9NYL5 469 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 KCPQ6ZWJ8 1503 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 ADCYAP1R1P41586 468 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 GALCP54803 685 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 ZC3H15Q8WU90 426 aaKnown RBP13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 SLC5A5Q92911 643 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 OGTO15294 1046 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 ZBTB24O43167 697 aaPredicted RBP13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 LCP1P13796 627 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 DHX9Q08211 1270 aaKnown RBP13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 SETDB1Q15047 1291 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 C6orf163Q5TEZ5 329 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 RAD9BQ6WBX8 426 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 APPL2Q8NEU8 664 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 GSDMBQ8TAX9 411 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 ATP2A3Q93084 1043 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 PGBD4Q96DM1 585 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 STAP1Q9ULZ2 295 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 GIPC1O14908 333 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 TADA2AO75478 443 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 ALDH1A1P00352 501 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 CLTAP09496 248 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 E4F1Q66K89 784 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 CENPPQ6IPU0 288 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 ATP8B4Q8TF62 1192 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 SMC6Q96SB8 1091 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 WDR70Q9NW82 654 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 PRG3Q9Y2Y8 225 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 CRCPO75575 148 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 MOCS2O96007 188 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 CCZ1BP86790 482 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 CCZ1P86791 482 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 NME3Q13232 169 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 PRPSAP1Q14558 356 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 BBS9Q3SYG4 887 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 CCDC13Q8IYE1 715 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 IL31RAQ8NI17 732 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 WDR24Q96S15 920 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 OSMRQ99650 979 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 KCNF1Q9H3M0 494 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 BLOC1S4Q9NUP1 217 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 CREB3O43889 395 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 AKAP3O75969 853 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 SLC26A2P50443 739 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 KLHDC7AQ5VTJ3 777 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 RIOX2Q8IUF8 465 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 C18orf8Q96DM3 657 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 POP1Q99575 1024 aaKnown RBP13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 SIK2Q9H0K1 926 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 HOMER3Q9NSC5 361 aa13.96□□□□□ -0.17
PTPRN2-202ENST00000389416 ITIH6Q6UXX5 1313 aa13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 ANO9A1A5B4 782 aa13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 TOM1L1O75674 476 aa13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 TJP3O95049 919 aa13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 TFRCP02786 760 aaKnown RBP13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 ITGB3P05106 788 aa13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 STX2P32856 288 aa13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 CACNB2Q08289 660 aaPredicted RBP13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 ADCY1Q08828 1119 aa13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 RBM41Q96IZ5 413 aaKnown RBP13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 GCNAQ96QF7 691 aa13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 SNX24Q9Y343 169 aa13.96□□□□□ -0.18
PTPRN2-202ENST00000389416 TRAPPC3O43617 180 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 GUCY2CP25092 1073 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 GBP1P32455 592 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 FUT2Q10981 343 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 CCDC6Q16204 474 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 KIAA0895Q8NCT3 520 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 COPS5Q92905 334 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 MTMR9Q96QG7 549 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 ERGIC2Q96RQ1 377 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 KIF9Q9HAQ2 790 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 TRIM10Q9UDY6 481 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 SSU72P8A0A1W2PR75 194 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 IL18RAPO95256 599 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 PMS1P54277 932 aaKnown RBP13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 HAS1Q92839 578 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 OSBPL9Q96SU4 736 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 CACNA1FO60840 1977 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 SYNGAP1Q96PV0 1343 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 KRT3P12035 628 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 EPHB4P54760 987 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 TFDP2Q14188 446 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 MMS22LQ6ZRQ5 1243 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 CCT6BQ92526 530 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 HPDLQ96IR7 371 aa13.95□□□□□ -0.18
PTPRN2-202ENST00000389416 DDX47Q9H0S4 455 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms