RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 WNT10BO00744 389 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 MYCLP12524 364 aaPredicted RBP11.74□□□□□ -0.53
BEST1-201ENST00000378043 COILP38432 576 aaPredicted RBP11.74□□□□□ -0.53
BEST1-201ENST00000378043 MFAP3P55082 362 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 CDR2Q01850 454 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 NSMFQ6X4W1 530 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 CNPY4Q8N129 248 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 PSPC1Q8WXF1 523 aaKnown RBP11.74□□□□□ -0.53
BEST1-201ENST00000378043 TATDN2Q93075 761 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 PGM2Q96G03 612 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 FBXL18Q96ME1 805 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 TIPINQ9BVW5 301 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 TMEM8AQ9HCN3 771 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 RASAL2Q9UJF2 1139 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 ARID2Q68CP9 1835 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
BEST1-201ENST00000378043 WDR46O15213 610 aaKnown RBP11.73□□□□□ -0.53
BEST1-201ENST00000378043 GGPS1O95749 300 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 IFI35P80217 286 aaPredicted RBP11.73□□□□□ -0.53
BEST1-201ENST00000378043 LLGL1Q15334 1064 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 ERMARDQ5T6L9 678 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 SEL1L2Q5TEA6 688 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 MORC4Q8TE76 937 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 ZNF653Q96CK0 615 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 MFSD14AQ96MC6 490 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 IWS1Q96ST2 819 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 PDCD2LQ9BRP1 358 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 OSBPL7Q9BZF2 842 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 ADGRA3Q8IWK6 1321 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 PARP14Q460N5 1801 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 DENND3A2RUS2 1198 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 SPOPO43791 374 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 HNRNPH1P31943 449 aaKnown RBP11.73□□□□□ -0.53
BEST1-201ENST00000378043 DENND2CQ68D51 928 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 MMS22LQ6ZRQ5 1243 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 SV2AQ7L0J3 742 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 HOOK3Q86VS8 718 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 RMDN3Q96TC7 470 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 NTPCRQ9BSD7 190 aaKnown RBP11.73□□□□□ -0.53
BEST1-201ENST00000378043 ANKEF1Q9NU02 776 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 RAB20Q9NX57 234 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 TELO2Q9Y4R8 837 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 WDR64B1ANS9 1081 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 ZNF862O60290 1169 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 DRD4P21917 467 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 FGFR4P22455 802 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 MMP13P45452 471 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 MKRN4PQ13434 485 aaPredicted RBP11.73□□□□□ -0.53
BEST1-201ENST00000378043 RNF187Q5TA31 235 aaPredicted RBP11.73□□□□□ -0.53
BEST1-201ENST00000378043 FBXL13Q8NEE6 735 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 LPAR1Q92633 364 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 ART4Q93070 314 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 WNK4Q96J92 1243 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 SEC16BQ96JE7 1060 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
BEST1-201ENST00000378043 TRIM7Q9C029 511 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 KIAA1683Q9H0B3 1180 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 PXMP2Q9NR77 195 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 UVRAGQ9P2Y5 699 aa11.73□□□□□ -0.53
BEST1-201ENST00000378043 CNOT7Q9UIV1 285 aaKnown RBP11.73□□□□□ -0.53
BEST1-201ENST00000378043 TLDC2A0PJX2 215 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 STBD1O95210 358 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 JAK3P52333 1124 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 PDE4CQ08493 712 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 ZNF568Q3ZCX4 644 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 ICE2Q659A1 982 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 ACAD10Q6JQN1 1059 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 C12orf50Q8NA57 414 aaPredicted RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 UHMK1Q8TAS1 419 aaKnown RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 ATXN2LQ8WWM7 1075 aaKnown RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 CENPTQ96BT3 561 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 ZNF317Q96PQ6 595 aaPredicted RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 PI4K2AQ9BTU6 479 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 CNOT10Q9H9A5 744 aaKnown RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 MAP3K20Q9NYL2 800 aaKnown RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 TESPA1A2RU30 521 aaPredicted RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 SMIM23A6NLE4 172 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 CLDN3O15551 220 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 RIPK2O43353 540 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 CHN1P15882 459 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 PDE6CP51160 858 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 SMTNP53814 917 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 KRT76Q01546 638 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 CYP24A1Q07973 514 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 ACTN3Q08043 901 aaPredicted RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 DMP1Q13316 513 aaPredicted RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 TNFAIP8L3Q5GJ75 292 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 SUGP1Q8IWZ8 645 aaKnown RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 EPS8L3Q8TE67 593 aaKnown RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 TEPSINQ96N21 525 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 NT5C1BQ96P26 610 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 HERPUD2Q9BSE4 406 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 FAM129AQ9BZQ8 928 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 PDGFDQ9GZP0 370 aaPredicted RBP11.72□□□□□ -0.53
BEST1-201ENST00000378043 AZI2Q9H6S1 392 aa11.72□□□□□ -0.53
BEST1-201ENST00000378043 LRRC19Q9H756 370 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms