RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 PPP1R13LQ8WUF5 828 aa19.68■□□□□ 0.74
IRF3-203ENST00000377139 SIX2Q9NPC8 291 aa19.68■□□□□ 0.74
IRF3-203ENST00000377139 COQ4Q9Y3A0 265 aa19.68■□□□□ 0.74
IRF3-203ENST00000377139 TRIP12Q14669 1992 aaPredicted RBP19.67■□□□□ 0.74
IRF3-203ENST00000377139 MCF2P10911 925 aa19.67■□□□□ 0.74
IRF3-203ENST00000377139 POU5F1Q01860 360 aaKnown RBP19.67■□□□□ 0.74
IRF3-203ENST00000377139 APBB1IPQ7Z5R6 666 aaPredicted RBP19.67■□□□□ 0.74
IRF3-203ENST00000377139 FMNL3Q8IVF7 1028 aa19.67■□□□□ 0.74
IRF3-203ENST00000377139 C17orf53Q8N3J3 647 aaPredicted RBP19.67■□□□□ 0.74
IRF3-203ENST00000377139 SPAG5Q96R06 1193 aa19.67■□□□□ 0.74
IRF3-203ENST00000377139 CDT1Q9H211 546 aa19.67■□□□□ 0.74
IRF3-203ENST00000377139 APEX2Q9UBZ4 518 aa19.67■□□□□ 0.74
IRF3-203ENST00000377139 CPSF3Q9UKF6 684 aaKnown RBP19.67■□□□□ 0.74
IRF3-203ENST00000377139 ZSCAN12O43309 604 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 TSPAN1O60635 241 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 MYCNP04198 464 aaPredicted RBP19.66■□□□□ 0.74
IRF3-203ENST00000377139 DARSP14868 501 aaKnown RBP19.66■□□□□ 0.74
IRF3-203ENST00000377139 HSPA6P17066 643 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 ARF4P18085 180 aaPredicted RBP19.66■□□□□ 0.74
IRF3-203ENST00000377139 TNNI1P19237 187 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 CLCN1P35523 988 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 AP3M2P53677 418 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 ZNF200P98182 395 aaPredicted RBP19.66■□□□□ 0.74
IRF3-203ENST00000377139 SFMBT2Q5VUG0 894 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 EEF1DP3Q658K8 133 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 RAD9BQ6WBX8 426 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 LMO3Q8TAP4 145 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 VTI1AQ96AJ9 217 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 CGRRF1Q99675 332 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 ADPGKQ9BRR6 497 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 FHOD1Q9Y613 1164 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 PTCH2Q9Y6C5 1203 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 FRMPD3Q5JV73 1810 aa19.66■□□□□ 0.74
IRF3-203ENST00000377139 CSDE1O75534 798 aaKnown RBP19.65■□□□□ 0.74
IRF3-203ENST00000377139 CYLC1P35663 651 aaPredicted RBP19.65■□□□□ 0.74
IRF3-203ENST00000377139 APBA1Q02410 837 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 TMEM62Q0P6H9 643 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 FAM47CQ5HY64 1035 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 ZBTB41Q5SVQ8 909 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 RSPH3Q86UC2 560 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 CCDC170Q8IYT3 715 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 FBXL13Q8NEE6 735 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 POP1Q99575 1024 aaKnown RBP19.65■□□□□ 0.74
IRF3-203ENST00000377139 OSMRQ99650 979 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 CHP1Q99653 195 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 TSEN34Q9BSV6 310 aaKnown RBP19.65■□□□□ 0.74
IRF3-203ENST00000377139 PDZD7Q9H5P4 517 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 PDE11AQ9HCR9 933 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 GINS2Q9Y248 185 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 MOXD2PA6NHM9 499 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 M0QZ92 97 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 TULP1O00294 542 aaPredicted RBP19.65■□□□□ 0.74
IRF3-203ENST00000377139 CCDC175P0C221 793 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 EIF4BP23588 611 aaKnown RBP19.65■□□□□ 0.74
IRF3-203ENST00000377139 AXLP30530 894 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 CRYBB1P53674 252 aaPredicted RBP19.65■□□□□ 0.74
IRF3-203ENST00000377139 PTPN11Q06124 597 aaPredicted RBP19.65■□□□□ 0.74
IRF3-203ENST00000377139 RAPGEF1Q13905 1077 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 C15orf39Q6ZRI6 1047 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 SV2AQ7L0J3 742 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 AIPL1Q9NZN9 384 aa19.65■□□□□ 0.74
IRF3-203ENST00000377139 A0A1B0GUA9 196 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 GOLGA6L9A6NEM1 432 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 TNFSF9P41273 254 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 MTF1Q14872 753 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 DCAF4L1Q3SXM0 396 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 ZACNQ401N2 412 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 SLC9C1Q4G0N8 1177 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 IQCEQ6IPM2 695 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 GDF6Q6KF10 455 aaPredicted RBP19.64■□□□□ 0.73
IRF3-203ENST00000377139 CATSPER4Q7RTX7 472 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 RPAINQ86UA6 219 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 WDR49Q8IV35 697 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 THNSL1Q8IYQ7 743 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 CPB2Q96IY4 423 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 STK33Q9BYT3 514 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 TOPORSQ9NS56 1045 aaPredicted RBP19.64■□□□□ 0.73
IRF3-203ENST00000377139 RAB20Q9NX57 234 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 TSKSQ9UJT2 592 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 DNAJC12Q9UKB3 198 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 PPP2R2CQ9Y2T4 447 aa19.64■□□□□ 0.73
IRF3-203ENST00000377139 EPN1Q9Y6I3 576 aaPredicted RBP19.64■□□□□ 0.73
IRF3-203ENST00000377139 SSU72P8A0A1W2PR75 194 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 ZC3H11AO75152 810 aaKnown RBP eCLIP19.63■□□□□ 0.735e-8■■■■□ 20.6
IRF3-203ENST00000377139 IL18RAPO95256 599 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 NDUFA10O95299 355 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 SERPING1P05155 500 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 CLTAP09496 248 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 ACLYP53396 1101 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 JAM2P57087 298 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 SNX17Q15036 470 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 ASIC2Q16515 512 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 SEZ6Q53EL9 994 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 TOGARAM2Q6ZUX3 1019 aa19.63■□□□□ 0.73
IRF3-203ENST00000377139 NHEJ1Q9H9Q4 299 aaPredicted RBP19.63■□□□□ 0.73
IRF3-203ENST00000377139 RPF1Q9H9Y2 349 aaKnown RBP19.63■□□□□ 0.73
IRF3-203ENST00000377139 TRMT1Q9NXH9 659 aaKnown RBP19.63■□□□□ 0.73
IRF3-203ENST00000377139 IPO7O95373 1038 aaKnown RBP19.62■□□□□ 0.73
IRF3-203ENST00000377139 C4BPAP04003 597 aaKnown RBP19.62■□□□□ 0.73
IRF3-203ENST00000377139 LHX8Q68G74 356 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms