RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 GLUD1P00367 558 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 THP07101 528 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 MYBP10242 640 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
NELFE-201ENST00000375425 PRPHP41219 470 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 TUSC3Q13454 348 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 HSP90AA2PQ14568 343 aaPredicted RBP15.68■□□□□ 0.1
NELFE-201ENST00000375425 NT5DC1Q5TFE4 455 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 EEF1DP3Q658K8 133 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 PALB2Q86YC2 1186 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 SUGP1Q8IWZ8 645 aaKnown RBP15.68■□□□□ 0.1
NELFE-201ENST00000375425 ZDHHC14Q8IZN3 488 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 TDRD5Q8NAT2 981 aaKnown RBP15.68■□□□□ 0.1
NELFE-201ENST00000375425 DPP7Q9UHL4 492 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 GDAQ9Y2T3 454 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 DMDP11532 3685 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 CCDC195A0A1B0GUA6 201 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 CASTOR2A6NHX0 329 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 CCDC169A6NNP5 214 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 RECQL4O94761 1208 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 ASGR2P07307 311 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 SPATA31D3P0C874 917 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 GJB2P29033 226 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 RILPL1Q5EBL4 403 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 IER5LQ5T953 404 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 ATF7IP2Q5U623 682 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 C15orf39Q6ZRI6 1047 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 SPATA31D4Q6ZUB0 917 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 FBXL6Q8N531 539 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 HASPINQ8TF76 798 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 RIN2Q8WYP3 895 aaPredicted RBP15.68■□□□□ 0.1
NELFE-201ENST00000375425 MMTAG2Q9BU76 263 aaKnown RBP15.68■□□□□ 0.1
NELFE-201ENST00000375425 UPF2Q9HAU5 1272 aaKnown RBP15.68■□□□□ 0.1
NELFE-201ENST00000375425 SORCS3Q9UPU3 1222 aa15.68■□□□□ 0.1
NELFE-201ENST00000375425 H3BQV1 296 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 HIP1RO75146 1068 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 BRD1O95696 1058 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 NPTX2P47972 431 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 PEX3P56589 373 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 MTMR3Q13615 1198 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 ZRSR1Q15695 479 aaKnown RBP15.67■□□□□ 0.1
NELFE-201ENST00000375425 DCAF4L1Q3SXM0 396 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 RINT1Q6NUQ1 792 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 CCDC149Q6ZUS6 474 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 GLYCTKQ8IVS8 523 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 UBALD2Q8IYN6 164 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 DAW1Q8N136 415 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 CMASQ8NFW8 434 aaPredicted RBP15.67■□□□□ 0.1
NELFE-201ENST00000375425 ACSF2Q96CM8 615 aaPredicted RBP15.67■□□□□ 0.1
NELFE-201ENST00000375425 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.67■□□□□ 0.1
NELFE-201ENST00000375425 FNIP2Q9P278 1114 aa15.67■□□□□ 0.1
NELFE-201ENST00000375425 SF3B1O75533 1304 aaKnown RBP eCLIP15.66■□□□□ 0.11e-19■■■■■ 448
NELFE-201ENST00000375425 MYO15AQ9UKN7 3530 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 TGM5O43548 720 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 RFPL2O75678 378 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 RPL17P18621 184 aaKnown RBP15.66■□□□□ 0.1
NELFE-201ENST00000375425 ATP2C1P98194 919 aaPredicted RBP15.66■□□□□ 0.1
NELFE-201ENST00000375425 NHLH1Q02575 133 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 NAB2Q15742 525 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 ELMSAN1Q6PJG2 1045 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 C1orf186Q6ZWK4 172 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 OTOP3Q7RTS5 596 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 KCNK18Q7Z418 384 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 GPR65Q8IYL9 337 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 RUSC1Q9BVN2 902 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 SMOC2Q9H3U7 446 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
NELFE-201ENST00000375425 TNFSF13BQ9Y275 285 aa15.66■□□□□ 0.1
NELFE-201ENST00000375425 USP34Q70CQ2 3546 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 SFI1A8K8P3 1242 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 KIF4AO95239 1232 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 C1RP00736 705 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 MCM2P49736 904 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 DMP1Q13316 513 aaPredicted RBP15.65■□□□□ 0.1
NELFE-201ENST00000375425 RTP2Q5QGT7 225 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 FAM171A1Q5VUB5 890 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 LILRA6Q6PI73 481 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 PRSS55Q6UWB4 352 aaPredicted RBP15.65■□□□□ 0.1
NELFE-201ENST00000375425 CEP57Q86XR8 500 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 HDAC7Q8WUI4 952 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 ACO2Q99798 780 aaKnown RBP15.65■□□□□ 0.1
NELFE-201ENST00000375425 TTPALQ9BTX7 342 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 PLEKHA4Q9H4M7 779 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 TMEM134Q9H6X4 195 aa15.65■□□□□ 0.1
NELFE-201ENST00000375425 WDR6Q9NNW5 1121 aaKnown RBP15.65■□□□□ 0.1
NELFE-201ENST00000375425 MYO10Q9HD67 2058 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 ZNF318Q5VUA4 2279 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 VWA3AA6NCI4 1184 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 PDGFBP01127 241 aaPredicted RBP15.64■□□□□ 0.09
NELFE-201ENST00000375425 CREMQ03060 361 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 HYIQ5T013 277 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 CYP26C1Q6V0L0 522 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 APBB1IPQ7Z5R6 666 aaPredicted RBP15.64■□□□□ 0.09
NELFE-201ENST00000375425 ALYREFQ86V81 257 aaKnown RBP15.64■□□□□ 0.09
NELFE-201ENST00000375425 DRC1Q96MC2 740 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 PNMA5Q96PV4 448 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 PLIN2Q99541 437 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 RHOBTB2Q9BYZ6 727 aa15.64■□□□□ 0.09
NELFE-201ENST00000375425 NT5C3AQ9H0P0 336 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms