RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ACAD11Q709F0 780 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 DEPTORQ8TB45 409 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 FNDC8Q8TC99 324 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ART4Q93070 314 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 CCDC22O60826 627 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 SERPINB7O75635 380 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ACSL3O95573 720 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 STARD3NLO95772 234 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 CSF1RP07333 972 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 PLCG1P19174 1290 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 HDAC4P56524 1084 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ASIC1P78348 528 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 STRN3Q13033 797 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 THOC5Q13769 683 aaKnown RBP10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ITGA9Q13797 1035 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 CYLC2Q14093 348 aaPredicted RBP10.19□□□□□ -0.78
SF3A3-201ENST00000373019 UBE3CQ15386 1083 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 SLC45A4Q5BKX6 768 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 AADACL2Q6P093 401 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 LRRC8BQ6P9F7 803 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 B3GNT6Q6ZMB0 384 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 C3orf62Q6ZUJ4 267 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ZBED8Q8IZ13 594 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 PIGBQ92521 554 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.19□□□□□ -0.782e-7■■□□□ 12
SF3A3-201ENST00000373019 NACA2Q9H009 215 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 KANSL2Q9H9L4 492 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 ZFP69BQ9UJL9 534 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 TMED5Q9Y3A6 229 aa10.19□□□□□ -0.78
SF3A3-201ENST00000373019 FGFR1P11362 822 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 NKX1-1Q15270 411 aaPredicted RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 TXNRD1Q16881 649 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 DPY19L2P1Q6NXN4 242 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 ALKBH5Q6P6C2 394 aaKnown RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 KLHDC10Q6PID8 442 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 TANGO6Q9C0B7 1094 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 ARL8BQ9NVJ2 186 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 TBCCD1Q9NVR7 557 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 CEP126Q9P2H0 1117 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 KANSL3Q9P2N6 904 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 BUD23O43709 281 aaKnown RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 EDF1O60869 148 aaKnown RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 ANPEPP15144 967 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 VCAM1P19320 739 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 UBA7P41226 1012 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 PPP1R2P41236 205 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 HALP42357 657 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 DCTN2Q13561 401 aaKnown RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 BCL2A1Q16548 175 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 CCDC24Q8N4L8 307 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 GLIS3Q8NEA6 775 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 PHF12Q96QT6 1004 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 RBM38Q9H0Z9 239 aaKnown RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 GANQ9H2C0 597 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 OSGEPQ9NPF4 335 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 TAS2R1Q9NYW7 299 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 ADGRA3Q8IWK6 1321 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 PGM3O95394 542 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 GNAT2P19087 354 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 ZNF211Q13398 564 aaPredicted RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 CLPPQ16740 277 aaPredicted RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 DTHD1Q6ZMT9 781 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 RFX8Q6ZV50 586 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 SAPCD2Q86UD0 394 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 TRIM50Q86XT4 487 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 TIMMDC1Q9NPL8 285 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 MTRF1LQ9UGC7 380 aaKnown RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.18□□□□□ -0.78
SF3A3-201ENST00000373019 FAM205AQ6ZU69 1335 aa10.18□□□□□ -0.78
SF3A3-201ENST00000373019 GSG1L2A8MUP6 293 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 OPHN1O60890 802 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 SMIM18P0DKX4 95 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 MUTP22033 750 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 ASIC2Q16515 512 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 CNNM4Q6P4Q7 775 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 RBM44Q6ZP01 1051 aaKnown RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 NLRP9Q7RTR0 991 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 SRRM1Q8IYB3 904 aaKnown RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 STMN2Q93045 179 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 HNRNPABQ99729 332 aaKnown RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 LOC102724428A0A0B4J2F2 783 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 C2CD2LO14523 706 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 WDR46O15213 610 aaKnown RBP10.17□□□□□ -0.78
SF3A3-201ENST00000373019 BIRC5O15392 142 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 STRNO43815 780 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 TFAP2AP05549 437 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 ALAS1P13196 640 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 PDE6AP16499 860 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 SIK1P57059 783 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 Q6ZNX1 250 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 PHLDB2Q86SQ0 1253 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 METTL25Q8N6Q8 603 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 PRELID2Q8N945 189 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 DENND1AQ8TEH3 1009 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 ALG3Q92685 438 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 SNX27Q96L92 541 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 RUNDC3BQ96NL0 473 aa10.17□□□□□ -0.78
SF3A3-201ENST00000373019 MPHOSPH6Q99547 160 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms