RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 DNAAF5Q86Y56 855 aa19.42■□□□□ 0.7
CD40-201ENST00000372276 CYP39A1Q9NYL5 469 aa19.42■□□□□ 0.7
CD40-201ENST00000372276 STYXL1Q9Y6J8 313 aa19.42■□□□□ 0.7
CD40-201ENST00000372276 BRCA1P38398 1863 aaKnown RBP19.42■□□□□ 0.7
CD40-201ENST00000372276 GOLGA8IPA6NC78 632 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 GOLGA8JA6NMD2 632 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 NFKBIEO00221 500 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 EBAG9O00559 213 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 HNRNPDLO14979 420 aaKnown RBP19.41■□□□□ 0.7
CD40-201ENST00000372276 TTI1O43156 1089 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 CYP26A1O43174 497 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 DAPK3O43293 454 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 PIGRP01833 764 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 KRT14P02533 472 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 SUPT20HL2P0C7V6 817 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 POTEJP0CG39 1038 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 YBX3P16989 372 aaKnown RBP eCLIP19.41■□□□□ 0.7
CD40-201ENST00000372276 ACTR2P61160 394 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 FMO1Q01740 532 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 SUPT20HL1Q3ZLR7 823 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 B4GALNT4Q76KP1 1039 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 ZNF564Q8TBZ8 553 aaPredicted RBP19.41■□□□□ 0.7
CD40-201ENST00000372276 CCDC127Q96BQ5 260 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 BICD1Q96G01 975 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 WRNIP1Q96S55 665 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 FMO2Q99518 471 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 AVENQ9NQS1 362 aaPredicted RBP19.41■□□□□ 0.7
CD40-201ENST00000372276 C1orf112Q9NSG2 853 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 FBXO40Q9UH90 709 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 PCDHA3Q9Y5H8 950 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 ARID2Q68CP9 1835 aa19.41■□□□□ 0.7
CD40-201ENST00000372276 RLFQ13129 1914 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 ZNF862O60290 1169 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 PPFIA2O75334 1257 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 SLC1A1P43005 524 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 PEX5P50542 639 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 RWDD2BP57060 319 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 PSMD6Q15008 389 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 STXBP2Q15833 593 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 CYP1B1Q16678 543 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 DCAF12L1Q5VU92 463 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 TRIM72Q6ZMU5 477 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 SV2AQ7L0J3 742 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 TMC3Q7Z5M5 1100 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 PALB2Q86YC2 1186 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 C3orf20Q8ND61 904 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 SEMA4DQ92854 862 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 SEPT9Q9UHD8 586 aaPredicted RBP19.4■□□□□ 0.7
CD40-201ENST00000372276 RRP15Q9Y3B9 282 aaKnown RBP19.4■□□□□ 0.7
CD40-201ENST00000372276 RIPK3Q9Y572 518 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 H0YGN5 161 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 ATG7O95352 703 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 COMTP21964 271 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 MAN1A1P33908 653 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 RFC5P40937 340 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 FNTAP49354 379 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 LIG4P49917 911 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 PRKCEQ02156 737 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 TBC1D10BQ4KMP7 808 aaPredicted RBP19.4■□□□□ 0.7
CD40-201ENST00000372276 CD101Q93033 1021 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 ZNF653Q96CK0 615 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 SAAL1Q96ER3 474 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 FNBP1Q96RU3 617 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 PCDHB18PQ96TA0 734 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 NUP85Q9BW27 656 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 MTRF1LQ9UGC7 380 aaKnown RBP19.4■□□□□ 0.7
CD40-201ENST00000372276 RSPH14Q9UHP6 348 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 LCMT1Q9UIC8 334 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 TRPC6Q9Y210 931 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 BCS1LQ9Y276 419 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 PCDHB2Q9Y5E7 798 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 NFS1Q9Y697 457 aa19.4■□□□□ 0.7
CD40-201ENST00000372276 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.7
CD40-201ENST00000372276 SPOPO43791 374 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 GRIN3BO60391 1043 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 NAMPTP43490 491 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 AP3M2P53677 418 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 MESDQ14696 234 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 TMEM132BQ14DG7 1078 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 CLEC16AQ2KHT3 1053 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 SH3D19Q5HYK7 790 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 C15orf39Q6ZRI6 1047 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 SAMD7Q7Z3H4 446 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 HOOK3Q86VS8 718 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 EXOC8Q8IYI6 725 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 BCAS4Q8TDM0 211 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 ALG3Q92685 438 aa19.39■□□□□ 0.69
CD40-201ENST00000372276 POLR3FQ9H1D9 316 aaPredicted RBP19.39■□□□□ 0.69
CD40-201ENST00000372276 FEZ2Q9UHY8 353 aaPredicted RBP19.39■□□□□ 0.69
CD40-201ENST00000372276 COL11A1P12107 1806 aaPredicted RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 ATXN2Q99700 1313 aaKnown RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 TMEM150BA6NC51 233 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 HMGCS2P54868 508 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 SLC39A4Q6P5W5 647 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 SYDE1Q6ZW31 735 aaPredicted RBP19.38■□□□□ 0.69
CD40-201ENST00000372276 MICALCLQ6ZW33 695 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 CYFIP1Q7L576 1253 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 SLC47A2Q86VL8 602 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 JAMLQ86YT9 394 aa19.38■□□□□ 0.69
CD40-201ENST00000372276 C12orf50Q8NA57 414 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms