RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 TAF11Q15544 211 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 SLC4A8Q2Y0W8 1093 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 ALFQ53S48 1182 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 IGSF22Q8N9C0 903 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 SEC14L1Q92503 715 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 ALG3Q92685 438 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 E2F7Q96AV8 911 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 PALD1Q9ULE6 856 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 MAP3K19Q56UN5 1328 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 ANKRD26Q9UPS8 1709 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 FZD9O00144 591 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 CBX4O00257 560 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 PES1O00541 588 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 NEMP1O14524 444 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 TADA3O75528 432 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 NCAM1P13591 858 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 BPIP17213 487 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 NAT1P18440 290 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 MC3RP41968 323 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 EPS15P42566 896 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 GEMIN4P57678 1058 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 JAG1P78504 1218 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 KIAA2012Q0VF49 1180 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 PAK1Q13153 545 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 DCTN1Q14203 1278 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 STAT4Q14765 748 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 TARBP2Q15633 366 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 CCDC73Q6ZRK6 1079 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 CATIPQ7Z7H3 387 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 DDX53Q86TM3 631 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 SMAP1Q8IYB5 467 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 ATRIPQ8WXE1 791 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 WNK4Q96J92 1243 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 GLIS2Q9BZE0 524 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 RNF38Q9H0F5 515 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 RANBP17Q9H2T7 1088 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 EPB41L1Q9H4G0 881 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 CNOT6Q9ULM6 557 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 TMCC3Q9ULS5 477 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 COA3Q9Y2R0 106 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 COQ6Q9Y2Z9 468 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 KCTD3Q9Y597 815 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 IRAK3Q9Y616 596 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 CGNL1Q0VF96 1302 aa5.87□□□□□ -1.47
ECHDC1-204ENST00000368292 KTN1Q86UP2 1357 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 TRIM64CA6NLI5 447 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 ZNF891A8MT65 544 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 PRRT4C9JH25 899 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 H0YIN7 160 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 M0R2C6 588 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 WNT9AO14904 365 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 IPO8O15397 1037 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 GPR39O43194 453 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 FIBPO43427 364 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 ORC4O43929 436 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 DGKIO75912 1065 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 TPM2P07951 284 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 SRGAP2CP0DJJ0 459 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 CPEP16870 476 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 PI3P19957 117 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 GRK2P25098 689 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 HOXC9P31274 260 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 GRK3P35626 688 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 ID4P47928 161 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 GUCY2FP51841 1108 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 TOMM20Q15388 145 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 KIZQ2M2Z5 673 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 FAM133BQ5BKY9 247 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 EMC4Q5J8M3 183 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 ARMC3Q5W041 872 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 DLK2Q6UY11 383 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 KSR2Q6VAB6 950 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 Q7L0L9 218 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 MILR1Q7Z6M3 343 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 FAM129CQ86XR2 697 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 KIF18BQ86Y91 864 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 MIB1Q86YT6 1006 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 ZC3H7AQ8IWR0 971 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 NXPE1Q8N323 547 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 WDR66Q8TBY9 1149 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 CPA5Q8WXQ8 436 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 FAM122AQ96E09 287 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 CCDC34Q96HJ3 373 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 AP5M1Q9H0R1 490 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 IPPKQ9H8X2 491 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 PTPRHQ9HD43 1115 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 TMEM51Q9NW97 253 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 STXBP5LQ9Y2K9 1186 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 TTC28Q96AY4 2481 aa5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 ARID1BQ8NFD5 2236 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-204ENST00000368292 PRUNE2Q8WUY3 3088 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 PRSS47A8MTI9 375 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 GOLGA6L22H0YM25 854 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 IPO5O00410 1097 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 HGSO14964 777 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 KATNA1O75449 491 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 F2P00734 622 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 SOD2P04179 222 aa5.85□□□□□ -1.47
ECHDC1-204ENST00000368292 HNRNPCP07910 306 aaKnown RBP eCLIP5.85□□□□□ -1.473e-6■□□□□ 11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms