RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MAST1Q9Y2H9 1570 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 ADGRA2Q96PE1 1338 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 KNOP1Q1ED39 458 aaKnown RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 LMBRD2Q68DH5 695 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 FAM162AQ96A26 154 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 TSSK1BQ9BXA7 367 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 LZTS3O60299 673 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 TLR2O60603 784 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 PPP3CCP48454 512 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 TOB2Q14106 344 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-203ENST00000359759 TTC23LQ6PF05 361 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 GLYCTKQ8IVS8 523 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 BEST2Q8NFU1 509 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 CNBD2Q96M20 576 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 ACAP3Q96P50 834 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 THTPAQ9BU02 230 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 EPN3Q9H201 632 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 SH3GLB2Q9NR46 395 aa16.93■□□□□ 0.3
COL18A1-203ENST00000359759 ANO9A1A5B4 782 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 AIM2O14862 343 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 ATP10BO94823 1461 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 TTC26A0AVF1 554 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 TRIM49P0CI25 452 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 TRIM49CP0CI26 452 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 CENPAP49450 140 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 RHOT1Q8IXI2 618 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 KCTD17Q8N5Z5 321 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 USP33Q8TEY7 942 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 EME1Q96AY2 570 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 TNFAIP2Q03169 654 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 SUPT20HL1Q3ZLR7 823 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-203ENST00000359759 TBC1D10CQ8IV04 446 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 C4orf33Q8N1A6 199 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 SH3GL2Q99962 352 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 C17orf80Q9BSJ5 609 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 FAM187AA6NFU0 413 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 C5orf58C9J3I9 102 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 GYS1P13807 737 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 MDH1P40925 334 aaKnown RBP16.92■□□□□ 0.3
COL18A1-203ENST00000359759 VSNL1P62760 191 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 LRRC8BQ6P9F7 803 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 CYFIP2Q96F07 1278 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 RHBDL2Q9NX52 303 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 GH2P01242 217 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 P3H1Q32P28 736 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 ITPRIPL1Q6GPH6 555 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 FAM160B2Q86V87 743 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 CDR2LQ86X02 465 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-203ENST00000359759 OR2W6PQ8NHA6 318 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 OSBPL3Q9H4L5 887 aa16.92■□□□□ 0.3
COL18A1-203ENST00000359759 EXOSC4Q9NPD3 245 aaKnown RBP16.92■□□□□ 0.3
COL18A1-203ENST00000359759 FOXN1O15353 648 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 PSMC5P62195 406 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 POLR3FQ9H1D9 316 aaPredicted RBP16.91■□□□□ 0.3
COL18A1-203ENST00000359759 ARHGEF12Q9NZN5 1544 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 RNF123Q5XPI4 1314 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 KRT7P08729 469 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 RASGRF1Q13972 1273 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 FAM182BQ5T319 152 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 CCDC81Q6ZN84 652 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 TRIM54Q9BYV2 358 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 RNPEPQ9H4A4 650 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 ARL2BPQ9Y2Y0 163 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 ADGRG1Q9Y653 693 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 CFAP43Q8NDM7 1665 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 FCER1AP12319 257 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 IYDQ6PHW0 289 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 FAM118BQ9BPY3 351 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 TBC1D23Q9NUY8 699 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 PCMTD2Q9NV79 361 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 DPYSL4O14531 572 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 PDAP1Q13442 181 aaKnown RBP16.91■□□□□ 0.3
COL18A1-203ENST00000359759 C6orf10Q5SRN2 563 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 PROM2Q8N271 834 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 SULT1E1P49888 294 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 TXNRD1Q16881 649 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 SWSAP1Q6NVH7 229 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 MFN1Q8IWA4 741 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 SLC30A5Q8TAD4 765 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 GRAMD1AQ96CP6 724 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 RMDN3Q96TC7 470 aa16.91■□□□□ 0.3
COL18A1-203ENST00000359759 FAM196BA6NMK8 535 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 FKBP9O95302 570 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 FKBP9P1Q75LS8 142 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 ZNF302Q9NR11 478 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 BFARQ9NZS9 450 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 USP17L10C9JJH3 530 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 TRIM66O15016 1216 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 CYTH3O43739 400 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 TMED10P49755 219 aaKnown RBP16.9■□□□□ 0.3
COL18A1-203ENST00000359759 PWP1Q13610 501 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 ANKS3Q6ZW76 656 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 ASZ1Q8WWH4 475 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 WDR24Q96S15 920 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 DHX36Q9H2U1 1008 aaKnown RBP16.9■□□□□ 0.3
COL18A1-203ENST00000359759 PARVAQ9NVD7 372 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 SELENONQ9NZV5 590 aa16.9■□□□□ 0.3
COL18A1-203ENST00000359759 CYP26A1O43174 497 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms