RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CDR2LQ86X02 465 aaPredicted RBP18.81■□□□□ 0.6
CLDN4-201ENST00000340958 NME8Q8N427 588 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 PLEKHO2Q8TD55 490 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 FAM212AQ96EL1 285 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 CPB2Q96IY4 423 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 SPAG5Q96R06 1193 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 DNAJC7Q99615 494 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 PLCB1Q9NQ66 1216 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 GTF2IRD1Q9UHL9 959 aa18.81■□□□□ 0.6
CLDN4-201ENST00000340958 SIP14410 1827 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 SOWAHDA6NJG2 315 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 LRRC53A6NM62 1247 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 OGTO15294 1046 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 ADAM17P78536 824 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 APBA1Q02410 837 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 MLLT1Q03111 559 aaPredicted RBP18.8■□□□□ 0.6
CLDN4-201ENST00000340958 KRT39Q6A163 491 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 TRIM65Q6PJ69 517 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 CATSPER4Q7RTX7 472 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 THNSL1Q8IYQ7 743 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 INTS2Q9H0H0 1204 aaKnown RBP18.8■□□□□ 0.6
CLDN4-201ENST00000340958 NUCKS1Q9H1E3 243 aaKnown RBP18.8■□□□□ 0.6
CLDN4-201ENST00000340958 ADAMTS10Q9H324 1103 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 CNTNAP2Q9UHC6 1331 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 PDE4DIPQ5VU43 2346 aa18.8■□□□□ 0.6
CLDN4-201ENST00000340958 GPR32O75388 356 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 CABYRO75952 493 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 CLSTN1O94985 981 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 FGFR4P22455 802 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 GTF2H1P32780 548 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 MNX1P50219 401 aaPredicted RBP18.79■□□□□ 0.6
CLDN4-201ENST00000340958 OSTNP61366 133 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 RAPGEF1Q13905 1077 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 PSMD6Q15008 389 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 ZBTB41Q5SVQ8 909 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 KLHDC7AQ5VTJ3 777 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 UBE2Q1Q7Z7E8 422 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 TMEM139Q8IV31 216 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 DIS3LQ8TF46 1054 aaKnown RBP18.79■□□□□ 0.6
CLDN4-201ENST00000340958 ADPGKQ9BRR6 497 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 TMEM117Q9H0C3 514 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 TMEM8AQ9HCN3 771 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 PDE11AQ9HCR9 933 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 NOD1Q9Y239 953 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 NOL4O94818 638 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 UCHL3P15374 230 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 ENPEPQ07075 957 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 SFMBT2Q5VUG0 894 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 APBB1IPQ7Z5R6 666 aaPredicted RBP18.79■□□□□ 0.6
CLDN4-201ENST00000340958 ZNF710Q8N1W2 664 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 EHBP1Q8NDI1 1231 aa18.79■□□□□ 0.6
CLDN4-201ENST00000340958 TRMT1Q9NXH9 659 aaKnown RBP18.79■□□□□ 0.6
CLDN4-201ENST00000340958 CCP110O43303 1012 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 ZNF500O60304 480 aaPredicted RBP18.78■□□□□ 0.6
CLDN4-201ENST00000340958 TSPAN1O60635 241 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 ARF4P18085 180 aaPredicted RBP18.78■□□□□ 0.6
CLDN4-201ENST00000340958 PROZP22891 400 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 TNFSF9P41273 254 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 ACLYP53396 1101 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 BIRC3Q13489 604 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 C1orf220Q5T0J3 134 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 EEF1DP3Q658K8 133 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 GDF6Q6KF10 455 aaPredicted RBP18.78■□□□□ 0.6
CLDN4-201ENST00000340958 PDXDC1Q6P996 788 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 CRELD2Q6UXH1 353 aaPredicted RBP18.78■□□□□ 0.6
CLDN4-201ENST00000340958 GLT1D1Q96MS3 346 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 GANQ9H2C0 597 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 PTPRHQ9HD43 1115 aa18.78■□□□□ 0.6
CLDN4-201ENST00000340958 TOPORSQ9NS56 1045 aaPredicted RBP18.78■□□□□ 0.6
CLDN4-201ENST00000340958 MCF2P10911 925 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 DARSP14868 501 aaKnown RBP18.77■□□□□ 0.6
CLDN4-201ENST00000340958 HOXC8P31273 242 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 PCBP1Q15365 356 aaKnown RBP eCLIP18.77■□□□□ 0.6
CLDN4-201ENST00000340958 AMHR2Q16671 573 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 LMBRD2Q68DH5 695 aaPredicted RBP18.77■□□□□ 0.6
CLDN4-201ENST00000340958 CCSAPQ6IQ19 270 aaPredicted RBP18.77■□□□□ 0.6
CLDN4-201ENST00000340958 GPIHBP1Q8IV16 184 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 ANKLE1Q8NAG6 615 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 ARRDC4Q8NCT1 418 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 CDT1Q9H211 546 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 PDZD7Q9H5P4 517 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 RPF1Q9H9Y2 349 aaKnown RBP18.77■□□□□ 0.6
CLDN4-201ENST00000340958 CDHR5Q9HBB8 845 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 FHOD1Q9Y613 1164 aa18.77■□□□□ 0.6
CLDN4-201ENST00000340958 MOXD2PA6NHM9 499 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 ZSCAN12O43309 604 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 PHACTR2O75167 634 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 CAPN2P17655 700 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 EIF4BP23588 611 aaKnown RBP18.77■□□□□ 0.59
CLDN4-201ENST00000340958 KCNJ6P48051 423 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 CRYBB1P53674 252 aaPredicted RBP18.77■□□□□ 0.59
CLDN4-201ENST00000340958 ITGA7Q13683 1181 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 SURF1Q15526 300 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 PTGISQ16647 500 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 BRSK2Q8IWQ3 736 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 BAP1Q92560 729 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 PAWRQ96IZ0 340 aaKnown RBP18.77■□□□□ 0.59
CLDN4-201ENST00000340958 DEF6Q9H4E7 631 aa18.77■□□□□ 0.59
CLDN4-201ENST00000340958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.77■□□□□ 0.59
CLDN4-201ENST00000340958 ARID5AQ03989 594 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms