RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 HSP90AA2PQ14568 343 aaPredicted RBP21.45■■□□□ 1.02
ITGA4-202ENST00000339307 FAM187BQ17R55 369 aa21.45■■□□□ 1.02
ITGA4-202ENST00000339307 C15orf39Q6ZRI6 1047 aa21.45■■□□□ 1.02
ITGA4-202ENST00000339307 SNX29Q8TEQ0 813 aa21.45■■□□□ 1.02
ITGA4-202ENST00000339307 RXFP1Q9HBX9 757 aa21.45■■□□□ 1.02
ITGA4-202ENST00000339307 RFPL2O75678 378 aa21.44■■□□□ 1.02
ITGA4-202ENST00000339307 THP07101 528 aa21.44■■□□□ 1.02
ITGA4-202ENST00000339307 ECM1Q16610 540 aa21.44■■□□□ 1.02
ITGA4-202ENST00000339307 RNF168Q8IYW5 571 aaPredicted RBP21.44■■□□□ 1.02
ITGA4-202ENST00000339307 SMG7Q92540 1137 aaKnown RBP21.44■■□□□ 1.02
ITGA4-202ENST00000339307 PAAF1Q9BRP4 392 aa21.44■■□□□ 1.02
ITGA4-202ENST00000339307 RAB34Q9BZG1 259 aa21.44■■□□□ 1.02
ITGA4-202ENST00000339307 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.44■■□□□ 1.02
ITGA4-202ENST00000339307 CHST7Q9NS84 486 aa21.44■■□□□ 1.02
ITGA4-202ENST00000339307 DDX19AQ9NUU7 478 aaKnown RBP21.44■■□□□ 1.02
ITGA4-202ENST00000339307 SF3B1O75533 1304 aaKnown RBP eCLIP21.43■■□□□ 1.02
ITGA4-202ENST00000339307 ACKR2O00590 384 aa21.43■■□□□ 1.02
ITGA4-202ENST00000339307 RECQL4O94761 1208 aa21.43■■□□□ 1.02
ITGA4-202ENST00000339307 FXR2P51116 673 aaKnown RBP eCLIP21.43■■□□□ 1.02
ITGA4-202ENST00000339307 PTGDRQ13258 359 aa21.43■■□□□ 1.02
ITGA4-202ENST00000339307 TUSC3Q13454 348 aa21.43■■□□□ 1.02
ITGA4-202ENST00000339307 MCTP1Q6DN14 999 aa21.43■■□□□ 1.02
ITGA4-202ENST00000339307 PRSS55Q6UWB4 352 aaPredicted RBP21.43■■□□□ 1.02
ITGA4-202ENST00000339307 PHOX2BQ99453 314 aa21.43■■□□□ 1.02
ITGA4-202ENST00000339307 CCDC169A6NNP5 214 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 TGM5O43548 720 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 MUTP22033 750 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 TCF15Q12870 199 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 ZRSR1Q15695 479 aaKnown RBP21.42■■□□□ 1.02
ITGA4-202ENST00000339307 FAM171A1Q5VUB5 890 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 C4orf32Q8N8J7 132 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 STAMQ92783 540 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 KIFAP3Q92845 792 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 KIF2CQ99661 725 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 PCDHB6Q9Y5E3 794 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 PLXNA3P51805 1871 aa21.42■■□□□ 1.02
ITGA4-202ENST00000339307 WDFY4Q6ZS81 3184 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 K7ERI5 159 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 EFEMP2O95967 443 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 EFNA5P52803 228 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 CREMQ03060 361 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 TDGQ13569 410 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 PDIA5Q14554 519 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 KRT79Q5XKE5 535 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 EEF1DP3Q658K8 133 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 FLCNQ8NFG4 579 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 CMASQ8NFW8 434 aaPredicted RBP21.41■■□□□ 1.02
ITGA4-202ENST00000339307 ATOH1Q92858 354 aaPredicted RBP21.41■■□□□ 1.02
ITGA4-202ENST00000339307 CCDC113Q9H0I3 377 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 PLEKHA4Q9H4M7 779 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 KCNK12Q9HB15 430 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 FAM86C1Q9NVL1 165 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 FBXL21Q9UKT6 434 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 DNM3Q9UQ16 869 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 STK24Q9Y6E0 443 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 C2orf16Q68DN1 1984 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 ZMYM2Q9UBW7 1377 aa21.41■■□□□ 1.02
ITGA4-202ENST00000339307 E9PMD0 336 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 PTGESO14684 152 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 KIF4AO95239 1232 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 U2AF2P26368 475 aaKnown RBP eCLIP21.4■■□□□ 1.02
ITGA4-202ENST00000339307 DCAF4L1Q3SXM0 396 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 RTP2Q5QGT7 225 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 ATF7IP2Q5U623 682 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 APBB1IPQ7Z5R6 666 aaPredicted RBP21.4■■□□□ 1.02
ITGA4-202ENST00000339307 TTPALQ9BTX7 342 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 CXCL16Q9H2A7 254 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 WDR6Q9NNW5 1121 aaKnown RBP21.4■■□□□ 1.02
ITGA4-202ENST00000339307 FNIP2Q9P278 1114 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 KIF3AQ9Y496 699 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 KMT2EQ8IZD2 1858 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 CLUHO75153 1309 aa21.4■■□□□ 1.02
ITGA4-202ENST00000339307 PP2D1A8MPX8 630 aa21.39■■□□□ 1.02
ITGA4-202ENST00000339307 H0Y858 1186 aa21.39■■□□□ 1.02
ITGA4-202ENST00000339307 EDN1P05305 212 aa21.39■■□□□ 1.02
ITGA4-202ENST00000339307 TOB1P50616 345 aaPredicted RBP21.39■■□□□ 1.02
ITGA4-202ENST00000339307 PEX3P56589 373 aa21.39■■□□□ 1.02
ITGA4-202ENST00000339307 C8orf34Q49A92 452 aa21.39■■□□□ 1.02
ITGA4-202ENST00000339307 GLRA4Q5JXX5 417 aa21.39■■□□□ 1.02
ITGA4-202ENST00000339307 DTHD1Q6ZMT9 781 aa21.39■■□□□ 1.02
ITGA4-202ENST00000339307 ST18O60284 1047 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 CDC25AP30304 524 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 OSTNP61366 133 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 NT5DC1Q5TFE4 455 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 CYP26C1Q6V0L0 522 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 HDAC7Q8WUI4 952 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 NT5C3AQ9H0P0 336 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 DENND4AQ7Z401 1863 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 STK25O00506 426 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 PSMD5Q16401 504 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 GET4Q7L5D6 327 aaPredicted RBP21.38■■□□□ 1.01
ITGA4-202ENST00000339307 TMEM105Q8N8V8 129 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 IGSF22Q8N9C0 903 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 RSAD2Q8WXG1 361 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 IRF2BPLQ9H1B7 796 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 ZDHHC7Q9NXF8 308 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 IGSF9Q9P2J2 1179 aa21.38■■□□□ 1.01
ITGA4-202ENST00000339307 ZDBF2Q9HCK1 2354 aa21.37■■□□□ 1.01
ITGA4-202ENST00000339307 N4BP1O75113 896 aaKnown RBP21.37■■□□□ 1.01
ITGA4-202ENST00000339307 HIP1RO75146 1068 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms