RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 S100A6P06703 90 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 TARSP26639 723 aaKnown RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 KPNA1P52294 538 aaPredicted RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 YARSP54577 528 aaKnown RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 ADAM17P78536 824 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 GNA13Q14344 377 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 STILQ15468 1287 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 ZNF829Q3KNS6 432 aaPredicted RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 CDKAL1Q5VV42 579 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 KIAA1841Q6NSI8 718 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 KIF6Q6ZMV9 814 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 USP43Q70EL4 1123 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 FRA10AC1Q70Z53 315 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CENPSQ8N2Z9 138 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 PI4K2BQ8TCG2 481 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CHPT1Q8WUD6 406 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 C1orf74Q96LT6 269 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CALN1Q9BXU9 219 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 VPS16Q9H269 839 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 SCPEP1Q9HB40 452 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 SAR1AQ9NR31 198 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 GLI2P10070 1586 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CCDC22O60826 627 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 GMNNO75496 209 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CDC27P30260 824 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 AP2B1P63010 937 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 TFAP4Q01664 338 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 GBE1Q04446 702 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 MRPL28Q13084 256 aaKnown RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 NFE2L1Q14494 772 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CNGA2Q16280 664 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 NFE2Q16621 373 aaPredicted RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 KRT24Q2M2I5 525 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 CERKLQ49MI3 558 aaPredicted RBP9.13□□□□□ -0.95
TDP1-201ENST00000335725 FAM122CQ6P4D5 195 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 MCUR1Q96AQ8 359 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 MYLK2Q9H1R3 596 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 RUBCNLQ9H714 662 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 MAD1L1Q9Y6D9 718 aa9.13□□□□□ -0.95
TDP1-201ENST00000335725 ATP7BP35670 1465 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 UGGT1Q9NYU2 1555 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 DDX3XO00571 662 aaKnown RBP eCLIP9.12□□□□□ -0.955e-8■■□□□ 12.6
TDP1-201ENST00000335725 HAUS5O94927 633 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 GAS8O95995 478 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 UQCRBP14927 111 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 GRIA2P42262 883 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 PPP2R2BQ00005 443 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 KRT81Q14533 505 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 SCFD1Q8WVM8 642 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 RASSF5Q8WWW0 418 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 CFAP57Q96MR6 1250 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 RNF38Q9H0F5 515 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 MUC3BQ9H195 1237 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 NEK6Q9HC98 313 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 GNPTGQ9UJJ9 305 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 PCDHB6Q9Y5E3 794 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 ABCA9Q8IUA7 1624 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 ZSCAN5CA6NGD5 496 aaPredicted RBP9.12□□□□□ -0.95
TDP1-201ENST00000335725 ARHGAP33O14559 1287 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 RGS13O14921 159 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 EEF2P13639 858 aaKnown RBP9.12□□□□□ -0.95
TDP1-201ENST00000335725 LONP1P36776 959 aaKnown RBP9.12□□□□□ -0.95
TDP1-201ENST00000335725 ECE1P42892 770 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 CBX5P45973 191 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 C21orf59P57076 290 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 EDRF1Q3B7T1 1238 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 AKAP4Q5JQC9 854 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 ANKRD53Q8N9V6 530 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 CEP19Q96LK0 163 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 TCEANC2Q96MN5 208 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 ACAP3Q96P50 834 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 LACRTQ9GZZ8 138 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 CUEDC2Q9H467 287 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 Q9H521 79 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 FANCEQ9HB96 536 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 EMILIN3Q9NT22 766 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 LIMA1Q9UHB6 759 aaKnown RBP9.12□□□□□ -0.95
TDP1-201ENST00000335725 KCNH3Q9ULD8 1083 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 ATP10BO94823 1461 aa9.12□□□□□ -0.95
TDP1-201ENST00000335725 NUTM2BA6NNL0 878 aaPredicted RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 NUTM2EB1AL46 878 aaPredicted RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 FYB1O15117 783 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 RNASEH2AO75792 299 aaKnown RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 ARHGEF15O94989 841 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 FUCA1P04066 466 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 NUDT17P0C025 328 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 BMP6P22004 513 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 PTGS2P35354 604 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 CENPAP49450 140 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 GNG2P59768 71 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 IRX4P78413 519 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 TTF1Q15361 905 aaPredicted RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 NAALADL2Q58DX5 795 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 ACSBG2Q5FVE4 666 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 ILDR1Q86SU0 546 aaPredicted RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 NOP9Q86U38 636 aaKnown RBP9.11□□□□□ -0.95
TDP1-201ENST00000335725 KBTBD2Q8IY47 623 aa9.11□□□□□ -0.95
TDP1-201ENST00000335725 ARL6IP6Q8N6S5 226 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms