RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 EML4Q9HC35 981 aaKnown RBP12.73□□□□□ -0.37
PCF11-201ENST00000298281 HOXC10Q9NYD6 342 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 TJP2Q9UDY2 1190 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 ADGRL2O95490 1459 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 TLR2O60603 784 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 FTCDO95954 541 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 PMS2P54278 862 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 NBPF9Q3BBW0 867 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 RASGRP4Q8TDF6 673 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 DDX50Q9BQ39 737 aaKnown RBP12.73□□□□□ -0.37
PCF11-201ENST00000298281 OXCT2Q9BYC2 517 aaPredicted RBP12.73□□□□□ -0.37
PCF11-201ENST00000298281 TMEM60Q9H2L4 133 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 RNPEPQ9H4A4 650 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 TRIM13O60858 407 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 HUS1O60921 280 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 TSC22D2O75157 780 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 CYP27A1Q02318 531 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 LAMC2Q13753 1193 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 CAMKK1Q8N5S9 505 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 PITPNM3Q9BZ71 974 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 STON1Q9Y6Q2 735 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 NAALADL2Q58DX5 795 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 UNC13DQ70J99 1090 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 CCNYL1Q8N7R7 359 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 UXS1Q8NBZ7 420 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 THTPAQ9BU02 230 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 GUCY2CP25092 1073 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 TP53BP2Q13625 1128 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 SMAD1Q15797 465 aaKnown RBP12.72□□□□□ -0.37
PCF11-201ENST00000298281 AKIRIN2Q53H80 203 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 COBLL1Q53SF7 1204 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 KIFC1Q9BW19 673 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 EXO5Q9H790 373 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 RALBP11234 206 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 SERPINB4P48594 390 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 BEST2Q8NFU1 509 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 SIKE1Q9BRV8 207 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 NOVA2Q9UNW9 492 aaKnown RBP12.72□□□□□ -0.37
PCF11-201ENST00000298281 GCC2Q8IWJ2 1684 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 PZPP20742 1482 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 A0A0G2JND7 137 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 C2orf54Q08AI8 447 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 KYAT1Q16773 422 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 C1orf146Q5VVC0 180 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 CIAPIN1Q6FI81 312 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 ZSCAN18Q8TBC5 510 aaPredicted RBP12.72□□□□□ -0.37
PCF11-201ENST00000298281 PDCD10Q9BUL8 212 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 STN1Q9H668 368 aaKnown RBP12.72□□□□□ -0.37
PCF11-201ENST00000298281 NFICP08651 508 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 RUNX1T1Q06455 604 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 CDR2LQ86X02 465 aaPredicted RBP12.72□□□□□ -0.37
PCF11-201ENST00000298281 VPS11Q9H270 941 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 PSD3Q9NYI0 1048 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 ADGBQ8N7X0 1667 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 GDF11O95390 407 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 FDX1P10109 184 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 SLC16A2P36021 539 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 TRIM72Q6ZMU5 477 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 TBC1D1Q86TI0 1168 aaPredicted RBP12.72□□□□□ -0.37
PCF11-201ENST00000298281 NUP93Q8N1F7 819 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 STAG2Q8N3U4 1231 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 XXYLT1Q8NBI6 393 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 GFM2Q969S9 779 aaKnown RBP12.72□□□□□ -0.37
PCF11-201ENST00000298281 BTBD6Q96KE9 485 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 FAM20AQ96MK3 541 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 KLHL25Q9H0H3 589 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
PCF11-201ENST00000298281 PBRM1Q86U86 1689 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 MAP3K13O43283 966 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 CPB1P15086 417 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 COPB2P35606 906 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 RBBP4Q09028 425 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 USP17L2Q6R6M4 530 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 HORMAD1Q86X24 394 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 GAS2L3Q86XJ1 694 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 SMYD4Q8IYR2 804 aaPredicted RBP12.71□□□□□ -0.37
PCF11-201ENST00000298281 RERGLQ9H628 205 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 NFIBO00712 420 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 KCNQ3O43525 872 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 CXCR5P32302 372 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 RCAN1P53805 252 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 KRT76Q01546 638 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 GSTA3Q16772 222 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 CLEC4GQ6UXB4 293 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 ENOSF1Q7L5Y1 443 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 CHSY1Q86X52 802 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
PCF11-201ENST00000298281 BRIP1Q9BX63 1249 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 SPRTNQ9H040 489 aaPredicted RBP12.71□□□□□ -0.37
PCF11-201ENST00000298281 ZSWIM5Q9P217 1185 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 KIRREL3Q8IZU9 778 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 ZNF614Q8N883 585 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 KRCC1Q9NPI7 259 aaPredicted RBP12.71□□□□□ -0.37
PCF11-201ENST00000298281 CEP72Q9P209 647 aa12.71□□□□□ -0.37
PCF11-201ENST00000298281 STXBP3O00186 592 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 SFNP31947 248 aa12.71□□□□□ -0.38
PCF11-201ENST00000298281 ADAMTS12P58397 1594 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms