RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 SLC29A2Q14542 456 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 HABP4Q5JVS0 413 aaKnown RBP15.04■□□□□ -0
COL1A2-201ENST00000297268 NLGN1Q8N2Q7 840 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 NEDD1Q8NHV4 660 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 KCNB2Q92953 911 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 ANKZF1Q9H8Y5 726 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 TBC1D22BQ9NU19 505 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 IRAK4Q9NWZ3 460 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 SMAD1Q15797 465 aaKnown RBP15.04■□□□□ -0
COL1A2-201ENST00000297268 SLC30A5Q8TAD4 765 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 WDR70Q9NW82 654 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 TULP4Q9NRJ4 1543 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 PAMP19021 973 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 MARK3P27448 753 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 PMLP29590 882 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 QARSP47897 775 aaKnown RBP15.04■□□□□ -0
COL1A2-201ENST00000297268 EFTUD2Q15029 972 aaKnown RBP eCLIP15.04■□□□□ -0
COL1A2-201ENST00000297268 BARGINQ6ZT62 677 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 LRRN4CLQ8ND94 238 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 KIFC3Q9BVG8 833 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 UVRAGQ9P2Y5 699 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 ZNF711Q9Y462 761 aa15.04■□□□□ -0
COL1A2-201ENST00000297268 RNF17Q9BXT8 1623 aaKnown RBP15.04■□□□□ -0
COL1A2-201ENST00000297268 FAM196BA6NMK8 535 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 FMO5P49326 533 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 BCAR1P56945 870 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 ARMCX2Q7L311 632 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 LRRC34Q8IZ02 419 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 APBA3O96018 575 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 KYNUQ16719 465 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 ZMAT2Q96NC0 199 aaKnown RBP15.03■□□□□ -0
COL1A2-201ENST00000297268 SLC5A4Q9NY91 659 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 PSMC3IPQ9P2W1 217 aaPredicted RBP15.03■□□□□ -0
COL1A2-201ENST00000297268 ASAP2O43150 1006 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 TYK2P29597 1187 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 HEATR6Q6AI08 1181 aaKnown RBP15.03■□□□□ -0
COL1A2-201ENST00000297268 EPB41L4AQ9HCS5 686 aaPredicted RBP15.03■□□□□ -0
COL1A2-201ENST00000297268 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
COL1A2-201ENST00000297268 NEU2Q9Y3R4 380 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 DUSP10Q9Y6W6 482 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 DNAL1Q4LDG9 190 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 ZBTB41Q5SVQ8 909 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 C12orf60Q5U649 245 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 DTNBP1Q96EV8 351 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 FAM84BQ96KN1 310 aaPredicted RBP15.03■□□□□ -0
COL1A2-201ENST00000297268 SUCLA2Q9P2R7 463 aaPredicted RBP15.03■□□□□ -0
COL1A2-201ENST00000297268 SNX5Q9Y5X3 404 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 ALKQ9UM73 1620 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 M0QYV0 167 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 SDC4P31431 198 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 CYTH1Q15438 398 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 C1orf228Q6PIY5 440 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 C3orf20Q8ND61 904 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 AGR3Q8TD06 166 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 RAPGEF5Q92565 580 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 VCPKMTQ9H867 229 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 RGL1Q9NZL6 768 aa15.03■□□□□ -0
COL1A2-201ENST00000297268 SYCE1LA8MT33 242 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 E2F6O75461 281 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 MRPS35P82673 323 aaKnown RBP15.02■□□□□ -0
COL1A2-201ENST00000297268 CNGA3Q16281 694 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 PAPD7Q5XG87 772 aaKnown RBP15.02■□□□□ -0
COL1A2-201ENST00000297268 HAUS6Q7Z4H7 955 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 GPD1LQ8N335 351 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 NCLNQ969V3 563 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 REEP2Q9BRK0 252 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 HPSEQ9Y251 543 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 TMEM253P0C7T8 217 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 SERPINB4P48594 390 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 SULF1Q8IWU6 871 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 SYN2Q92777 582 aaPredicted RBP15.02■□□□□ -0
COL1A2-201ENST00000297268 RMDN3Q96TC7 470 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 MAP3K14Q99558 947 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 CD209Q9NNX6 404 aa15.02■□□□□ -0
COL1A2-201ENST00000297268 EDRF1Q3B7T1 1238 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 RWDD4Q6NW29 188 aaKnown RBP15.02□□□□□ -0.01
COL1A2-201ENST00000297268 METTL23Q86XA0 190 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 CATSPER1Q8NEC5 780 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 ZNF341Q9BYN7 854 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 COMTP21964 271 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 OSBPP22059 807 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 KRT76Q01546 638 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 SCG3Q8WXD2 468 aaKnown RBP15.02□□□□□ -0.01
COL1A2-201ENST00000297268 ACAP3Q96P50 834 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 FAM193BQ96PV7 902 aaPredicted RBP15.02□□□□□ -0.01
COL1A2-201ENST00000297268 PLAGL2Q9UPG8 496 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 SETBP1Q9Y6X0 1596 aa15.02□□□□□ -0.01
COL1A2-201ENST00000297268 COPB2P35606 906 aa15.01□□□□□ -0.01
COL1A2-201ENST00000297268 SCTRP47872 440 aa15.01□□□□□ -0.01
COL1A2-201ENST00000297268 EIF3EP60228 445 aaKnown RBP15.01□□□□□ -0.01
COL1A2-201ENST00000297268 CDKL3Q8IVW4 592 aaPredicted RBP15.01□□□□□ -0.01
COL1A2-201ENST00000297268 RCOR2Q8IZ40 523 aa15.01□□□□□ -0.01
COL1A2-201ENST00000297268 FLAD1Q8NFF5 587 aa15.01□□□□□ -0.01
COL1A2-201ENST00000297268 DLGAP2Q9P1A6 1054 aa15.01□□□□□ -0.01
COL1A2-201ENST00000297268 PRDM4Q9UKN5 801 aa15.01□□□□□ -0.01
COL1A2-201ENST00000297268 CAPN6Q9Y6Q1 641 aa15.01□□□□□ -0.01
COL1A2-201ENST00000297268 INO80Q9ULG1 1556 aaPredicted RBP15.01□□□□□ -0.01
COL1A2-201ENST00000297268 PAPOLAP51003 745 aaKnown RBP15.01□□□□□ -0.01
COL1A2-201ENST00000297268 GPC3P51654 580 aa15.01□□□□□ -0.01
COL1A2-201ENST00000297268 CPSF3Q9UKF6 684 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms