RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 DHX34Q14147 1143 aaKnown RBP18.27■□□□□ 0.52
CDCP1-201ENST00000296129 TMCO4Q5TGY1 634 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 SAMD7Q7Z3H4 446 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 ALKBH8Q96BT7 664 aaKnown RBP18.27■□□□□ 0.52
CDCP1-201ENST00000296129 LRRC1Q9BTT6 524 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 PPARGP37231 505 aaPredicted RBP18.27■□□□□ 0.52
CDCP1-201ENST00000296129 PPP2R2AP63151 447 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 SNAPC2Q13487 334 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 EDRF1Q3B7T1 1238 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 ANKRD20A4Q4UJ75 823 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 ANKRD20A8PQ5CZ79 823 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 ANKRD20A2Q5SQ80 823 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 ANKRD20A1Q5TYW2 823 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 CATSPER3Q86XQ3 398 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 SLC1A1P43005 524 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 GALCP54803 685 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 SMAD1Q15797 465 aaKnown RBP18.27■□□□□ 0.52
CDCP1-201ENST00000296129 TC2NQ8N9U0 490 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 TRIM55Q9BYV6 548 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 HACL1Q9UJ83 578 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 FBXL5Q9UKA1 691 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.27■□□□□ 0.52
CDCP1-201ENST00000296129 PPP1R3GB7ZBB8 358 aa18.27■□□□□ 0.51
CDCP1-201ENST00000296129 GNGT2O14610 69 aa18.27■□□□□ 0.51
CDCP1-201ENST00000296129 APOL1O14791 398 aa18.27■□□□□ 0.51
CDCP1-201ENST00000296129 RPA1P27694 616 aa18.27■□□□□ 0.51
CDCP1-201ENST00000296129 ZC3H18Q86VM9 953 aaKnown RBP18.27■□□□□ 0.51
CDCP1-201ENST00000296129 SPON1Q9HCB6 807 aa18.27■□□□□ 0.51
CDCP1-201ENST00000296129 HPCAL4Q9UM19 191 aa18.27■□□□□ 0.51
CDCP1-201ENST00000296129 SPATA31D1Q6ZQQ2 1576 aa18.27■□□□□ 0.51
CDCP1-201ENST00000296129 PXDNQ92626 1479 aa18.27■□□□□ 0.51
CDCP1-201ENST00000296129 H3BRJ5 948 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 EIF3DO15371 548 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDCP1-201ENST00000296129 NCOA4Q13772 614 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 KCNH7Q9NS40 1196 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 CHEK2O96017 543 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 SLC9A1P19634 815 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 HOXD10P28358 340 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 ARSEP51690 589 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 TARSL2A2RTX5 802 aaKnown RBP18.26■□□□□ 0.51
CDCP1-201ENST00000296129 DCTN3O75935 186 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 KITP10721 976 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 NCAPHQ15003 741 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 ELMOD1Q8N336 334 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 RIT2Q99578 217 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 DEFB129Q9H1M3 183 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 SSU72P8A0A1W2PR75 194 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 FRMD3A2A2Y4 597 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 GH1P01241 217 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 HIBCHQ6NVY1 386 aaPredicted RBP18.26■□□□□ 0.51
CDCP1-201ENST00000296129 CDC26Q8NHZ8 85 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 ATG4CQ96DT6 458 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 SIK2Q9H0K1 926 aa18.26■□□□□ 0.51
CDCP1-201ENST00000296129 FGFR4P22455 802 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 RAD9BQ6WBX8 426 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 NDUFAF2Q8N183 169 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 TAAR1Q96RJ0 339 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 UNC45AQ9H3U1 944 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 TERF2Q15554 542 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 SYT2Q8N9I0 419 aaPredicted RBP18.25■□□□□ 0.51
CDCP1-201ENST00000296129 KIF3CO14782 793 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 DYNC1LI2O43237 492 aaPredicted RBP18.25■□□□□ 0.51
CDCP1-201ENST00000296129 RFC5P40937 340 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 TMEM132DQ14C87 1099 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 KCNB2Q92953 911 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 DDX27Q96GQ7 796 aaKnown RBP18.25■□□□□ 0.51
CDCP1-201ENST00000296129 TRAIPQ9BWF2 469 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 SP110Q9HB58 689 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 PPARGC1AQ9UBK2 798 aaKnown RBP18.25■□□□□ 0.51
CDCP1-201ENST00000296129 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
CDCP1-201ENST00000296129 GYPCP04921 128 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 SULT1E1P49888 294 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 VSNL1P62760 191 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 OCRLQ01968 901 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 FRA10AC1Q70Z53 315 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 TBC1D1Q86TI0 1168 aaPredicted RBP18.25■□□□□ 0.51
CDCP1-201ENST00000296129 ZNF710Q8N1W2 664 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 RBBP8NLQ8NC74 664 aaPredicted RBP18.25■□□□□ 0.51
CDCP1-201ENST00000296129 TNIP3Q96KP6 325 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 TMEM131LA2VDJ0 1609 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 CPB1P15086 417 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 TMEM62Q0P6H9 643 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 DRP2Q13474 957 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 RNF219Q5W0B1 726 aaPredicted RBP18.25■□□□□ 0.51
CDCP1-201ENST00000296129 ENGASEQ8NFI3 743 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 LMCD1Q9NZU5 365 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 PPP1R9AQ9ULJ8 1098 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 SNX9Q9Y5X1 595 aa18.25■□□□□ 0.51
CDCP1-201ENST00000296129 GYS1P13807 737 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 MX2P20592 715 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 KIF19Q2TAC6 998 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 BTBD8Q5XKL5 378 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 COPS2P61201 443 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 MMS22LQ6ZRQ5 1243 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 WDR75Q8IWA0 830 aaKnown RBP18.24■□□□□ 0.51
CDCP1-201ENST00000296129 FBXO41Q8TF61 875 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 C18orf8Q96DM3 657 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 ATP6V1G3Q96LB4 118 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 DFFAO00273 331 aa18.24■□□□□ 0.51
CDCP1-201ENST00000296129 MSH4O15457 936 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms